Gossypium arboreum (tree cotton): 108478191
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Entry
108478191 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108478191
KO
K14856
protein SDA1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108478191
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108478191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
108478191
NCBI-ProteinID:
XP_017636112
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All DBs
Position
12:119164689..119170179
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AA seq
809 aa
AA seq
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MVSMVSGSAEPLSASGRSSEKLSLPSLQSKMKTDPEGYETELHLIRNQFYSALELFQQQA
ALNFSSISGVGADPTVAKDLSDRAMFLAHVTPFYPKQLAEFPSDLAAFLKSSARTLPSGL
RFHATQAVILLVNRKIIDIKDTLSLFMELQTLDDRNLRKLAFSHVVHSIRRMNKNHKNEA
KNRSLQNILFGLLQQDDEAKAKRSLITLCELHRRKVWFDERTANAICMACFHSSSRIMIA
VLSFLLDYEKIENDDEDSDDLSSEDEMTQNPHVVISKETVYKAHHKGTAASKKKKKAKLQ
RAIRSMKRQQRLSSESSNCSYYSPLYHLKDAQGFVEKLFSRLQTCNERFEVKMMMLKVIA
RTVGLHRLILLNFYPFLQRYVQPHQKDITNLLAAAVQACHDMVPPDAVEPLFKQIVNQFV
HDRSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLVLYKKSHEKAVSAAARSLITLFREV
CPSLLVKKDRGRPMDPKAKPKSYGEVNVLSNVPDIELLEQDDDIGGSEDDESGDEAVSIS
SDDGNEDNDDEESQYTANDGSEDEDVLDEEGDENDSVDEYESDIDDANEDDSDDEDKGDT
EELETEEDDYTEEVSGPSKAGDSAGDGGNEDQKTKASKRKLSDFEGQLIAADTSLRALKR
LAEAKTSHASSDSMDGILSDEHFQRIKKLKAKKEAKTALAQQGFKIPSSDQLSFKRVDPS
KLEAHVRLRLSKEERLALVKAGREDRGQYQARTAIKQKKTGGLSNRQKEHKKYMPLAAKK
AKAQRSRQEKNKKKSRSGKQFRGKKAWKQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatggtcagtggctcagcggagcctctctctgcatcgggtcggagctcagag
aagctgagcctcccatccctccaatccaaaatgaaaactgatccggaaggctatgaaacg
gagctccatctcatccgcaatcaattctattccgctcttgagctatttcaacagcaagcg
gctctgaatttctcctccatcagtggcgtcggtgctgacccaactgtggctaaggacctc
agtgaccgtgccatgttcttggcccatgtcacgccgttctatcccaagcagctcgctgag
ttcccttccgatctcgcagcgtttctgaaatcatctgcaaggactcttccgtcagggctt
agattccatgccactcaagccgtcattctcctcgttaaccggaagattattgatataaag
gacactttatcgttgttcatggaattgcagacactagatgataggaatttgaggaaatta
gcattttctcatgttgttcatagcattagaagaatgaacaagaatcataagaatgaggcc
aagaatcgctcccttcagaatatcttgtttggcttattgcagcaagatgatgaagcaaaa
gcgaaaaggtctctaattactttatgtgaacttcatcgaagaaaggtttggtttgatgaa
aggacagcaaatgcaatttgtatggcatgttttcattcatcttctagaataatgattgct
gtgctctcttttctccttgattatgagaagattgaaaacgatgatgaggattcagatgat
ttaagtagtgaagatgaaatgacacaaaatccccacgttgttatcagcaaagagacagtt
tacaaggcacaccataagggtacagctgctagcaagaagaaaaagaaagcgaaactacag
cgtgctattcgtagcatgaaaaggcagcaacgcctgtcatcagaaagtagcaattgtagt
tattattcacccctttatcatctgaaagatgcacagggatttgtagaaaagcttttttct
cgccttcaaacctgcaatgaacgatttgaggttaaaatgatgatgttgaaagtaattgct
agaacagttggccttcaccgtctgatattattaaatttctacccttttcttcaaagatat
gttcagcctcatcagaaagatatcactaatttacttgcagcagcagttcaggcctgccac
gatatggttcctcctgatgcagttgagccattgttcaaacaaatagtaaaccaatttgtt
catgatcgttcacgcccagaggccattgctgttggactgaatgtgataagggaaatatgc
ctgcgcatgcctttgttgatgactgaagatttgctacaagatctcgtattgtataaaaag
tcacatgagaaggcagtttcagctgcagctcgctcgctcattactttgtttagagaggtt
tgcccatcactgctggttaagaaggaccgaggccgtccaatggaccctaaggcaaaacca
aagtcatatggagaagtcaatgtccttagcaatgtccctgacattgaattattggaacaa
gacgatgacattggtggcagtgaggatgatgaaagtggagatgaggctgtatctattagt
tctgatgatggcaatgaagacaatgatgatgaagaaagccagtatactgcaaatgatggg
agtgaggatgaagatgtattggatgaagaaggtgatgagaatgacagtgttgatgaatac
gagagtgacattgatgatgccaatgaggatgacagtgatgatgaggataagggcgataca
gaggagttggaaactgaagaggatgattatactgaagaagttagtggtccttctaaagca
ggtgacagtgctggagatggtggaaatgaagatcaaaagaccaaggcaagtaagagaaaa
ttgtctgatttcgagggtcaacttattgctgctgatacaagtcttcgagctttaaaaagg
ttggcagaggcaaagacgagccatgcttcatcagactcaatggatggtattctctctgat
gagcatttccaaaggatcaagaaactaaaggctaagaaggaagcaaaaactgctttggct
caacaagggtttaagattccaagttctgatcaactaagtttcaaacgagtagatccctca
aagcttgaagcccatgtccgactcaggcttagcaaggaggaaaggctagcattggtaaaa
gcaggcagggaagacagagggcagtaccaggctcgaactgccatcaaacagaaaaagact
ggtggtttaagcaaccgtcagaaagagcacaagaagtatatgccgcttgctgcgaagaaa
gccaaagctcaaagatctcgacaagagaaaaataagaagaagtcacgttctggcaaacag
ttccgtgggaagaaagcttggaagcaatga
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