Gossypium arboreum (tree cotton): 108478773
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Entry
108478773 CDS
T05776
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108478773
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108478773
NCBI-ProteinID:
XP_017636723
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Position
12:complement(2847131..2849558)
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AA seq
597 aa
AA seq
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MAVDSPLSSQLGPPVCERDAKALHFIEETTSHADSVQDRVLTEILTRNSQTEYLTRFKLN
GATDRETFKSKLPIITYEDLQPEIHRIANGDRSAILSAHPISEFLTSSGTSAGERKLMPT
IKEELDRRRLLYSLLMPVMNLYVPGLERGKGLYFLFVKSETRTPGGLLARPVLTSYYKSD
HFKTRPYDPYNVYTSPNEAILCPDSFQSMYAQMLCGLLQRQQVLRVGAVFASGLLRAIRF
LQLNWPQLTQDIETGALNPKLTDPSLREYMDKILKPNPELAEYVRHECSKDNWEGIIARI
WQNTKYLDVIVTGAMAQYIPTLDYYSGGLPLACTMYASSECYFGLNLNPMCKPSQVSYTI
MPNMAYFEFLPRDPNSFGFPRDSPPKLVDLVDVEVGKEYELVITTYAGLYRYRVGDILRV
TGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVENASRLLREFNTRVVEYTSYADTR
TIPGHYVIYWELLGKDSANSPTDEVLKQCCLAMEESLNSVYRQGRVADNSIGPLEIRVVK
NGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDYRVVSSHFSPASPHWTPERR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgattctcctctctcatctcagctgggtccaccagtatgcgagagagatgcc
aaagctttgcacttcatagaggaaaccactagccatgccgattcagttcaagacagagtc
ctgaccgaaatcttaacccgaaactcccagactgagtaccttacaaggttcaaactcaac
ggtgcaacagaccgtgaaacgttcaagtccaaacttccgatcattacatacgaggacctt
cagcctgaaatccaccgtattgctaatggtgaccgctctgccattttgtctgcccacccc
atctccgaatttctcaccagctccgggacttcagctggggagagaaaattgatgccaaca
attaaggaagagctagatcgtcgccggttgctctacagtttactcatgccagtaatgaat
ctttatgtgccgggattggagagaggcaagggactttacttcctgttcgtgaagtctgaa
actaggaccccaggtggtctcttggctcgccctgtgttgaccagttactacaagagtgac
catttcaagacacgaccctatgacccttataatgtttacaccagccccaacgaagccatc
ctatgtcccgactctttccaaagcatgtacgcccagatgctttgcggtctcctccaacgc
caacaagtccttcgagtgggcgcagtgttcgcctcaggtttactccgcgcaatcaggttc
cttcagctgaattggcctcaactcacccaggatatcgaaacaggtgccttgaaccctaaa
ctcaccgacccttcactaagggaatacatggataagatcctaaaacccaaccctgaactc
gccgagtatgttcgccatgaatgttcgaaagacaactgggaaggaatcattgctagaatt
tggcaaaacaccaagtacctcgacgttatagttactggtgctatggcacagtatattcca
acgctggattattacagtggtgggttacctttagcttgcactatgtacgcttcgtccgaa
tgttattttggtttgaaccttaaccccatgtgtaaaccatcacaagtttcttataccatc
atgccgaacatggcatacttcgagttcttaccccgcgatcctaactcatttggtttccct
cgtgattcacctcctaaactcgttgaccttgttgatgtggaagttgggaaagaatacgag
cttgtaatcacaacttatgcagggttgtacaggtaccgagtcggtgacatcctccgagtc
actggattccacaactcagccccgcaattccatttcgtgaggaggaagaacgtgttgctc
agcattgactcggacaaaaccgatgaggcggagttacaaaaggcagttgaaaatgcttcc
cgactcttgcgtgagttcaacaccagagtcgttgaatacacgagttacgcggacacaagg
acaatccccggtcactacgtgatatactgggaattgttagggaaagactcagctaactcg
cctactgatgaggtcctgaaacaatgctgcttagcaatggaggagtctctaaactcagtg
taccgacagggccgagttgcggataactcaataggtccactggaaatccgtgtggtaaaa
aacggcacattcgaagagttaatggattacgccatatcaagaggggcatccatcaaccaa
tacaaggttccaaggtgtgttaacttcactccaatcatggagttgctcgattatagggtg
gtatcttcgcattttagcccagcgtcgccacattggaccccagaaagaagatga
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