Gossypium arboreum (tree cotton): 108478806
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Entry
108478806 CDS
T05776
Name
(RefSeq) 25.3 kDa vesicle transport protein
KO
K08517
vesicle transport protein SEC22
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04130
SNARE interactions in vesicular transport
gab04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108478806
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108478806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108478806
Membrane trafficking [BR:
gab04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
108478806
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Gene cluster
GFIT
Motif
Pfam:
Longin
bCoV_NS6
SelP_N
Motif
Other DBs
NCBI-GeneID:
108478806
NCBI-ProteinID:
XP_017636751
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All DBs
Position
12:118286845..118288314
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AA seq
229 aa
AA seq
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MVKLTIVGRVKDGLPLAQEARYMNNETTTSHNLSSNYKQQAEFLLNEISKGALPLPSMTI
RVDHHSFNYLVVNGICFITLCDSSYPRKLAFNYLQDLQKEFDKFDNGLIYKITKPYSFVK
FDSIISSIRKQYIDTRTQANLSKLNANRHRELDIVTGNMSDIVERRRNSEILETPAANYT
PQSSSLLWGSPRLEAIALIWTPIAIITVIAWILLWVSLVFTDDYLISTL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctaaccattgttggaagagtgaaagatgggttaccactggcacaagaagca
aggtacatgaacaacgagacgacgacgtctcacaacttatcatctaactacaagcaacaa
gctgagttccttctcaatgaaatctccaaaggagctttaccacttccctcaatgaccatc
cgcgttgatcaccattctttcaactatttggtggtgaatggaatctgcttcatcacatta
tgcgattcttcatatccaagaaaactagcattcaattatcttcaagatttgcaaaaggag
tttgacaagtttgataatggcctcatttacaaaattactaaaccatacagctttgttaaa
ttcgatagtattatttctagtattaggaagcaatacattgatacaagaacacaggccaat
ttatcgaagctgaatgctaatcgtcatcgagaactcgatatagttaccggaaacatgtct
gatatcgtagaaagaagacgaaattcggaaatattagagacaccagcagctaattatacc
cctcagagctcctctctattatggggttctccacggcttgaggcaattgcattgatttgg
acacccattgcaatcattactgtaattgcttggattcttttatgggttagcctagttttt
acagatgactacttaatatcaactttgtag
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