Gossypium arboreum (tree cotton): 108479071
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Entry
108479071 CDS
T05776
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04016
MAPK signaling pathway - plant
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108479071
04075 Plant hormone signal transduction
108479071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108479071
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108479071
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Motif
Pfam:
bHLH-MYC_N
HLH
PAH
bHLH-TF_ACT-like_plant
Pox_A_type_inc
RBR
TcdA1_RBD_2
Motif
Other DBs
NCBI-GeneID:
108479071
NCBI-ProteinID:
XP_017636983
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Position
12:91874379..91876327
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AA seq
540 aa
AA seq
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MYFHNKNKNLLQGLSASQPFRFPHCIHFILVSLLFFHPLAFQSTRFSFVSHLSAMEELII
SPSSSSSLVSFSQETPPSTLQQRLQFIVQSHQEWWTYAIFWQTSTDDHGRLFLAWEDGHF
QGTKDTSPKSTPNNNNNNMYSIQGLHNERRNVLKGLQALIGDNHDINGSLVDGTDITDAE
WFYVMSLTRSFSVGDGVLGKVLSTGSLVWLTGAHELQFNDCERAREAQLHGIGTLVCIPT
NRGVLELGSSDMIKENWELVQQVKSLFRFDPNLISGSTQFLERTISFPDIGLLAGIEEEN
GGPDNKTIEDLKPGQQSSYVDSENSDSDGALLAVNNTEKIRTPKKRGRKPGLRRDTPVNH
VEAERQRREKLNHRFYALRAAVPNVSRMDKASLLSDAVTYITELKSKIEDLESQLRKVCN
EKVKVETIDAMDNQSTTTSEEQAAARPSNSSSAATARFSDLQLDVKVMGNDDAIIRVQSE
NVNYPGARLMSALRDLEFQVHHASMSCVNELMLQDIIAKIPYGLTSEEAIKSALLRRLHQ
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcacaacaaaaacaaaaacctcctgcaggggctctcagccagtcagcctttt
agattcccacattgtattcattttatcctcgtttctctccttttttttcatcccttggca
tttcagtccacacgtttttcttttgtttctcatttgtcagccatggaagaactaatcata
tctccatcttcatcttcatcactagtttcattttcccaggaaactccaccttcaacccta
cagcaaaggcttcaattcatagtccaaagccatcaagaatggtggacatatgccatattt
tggcagacgtcaaccgacgaccacggtcgtttgttcttggcttgggaagatggacatttt
caaggaaccaaagacacatctcccaaatcaacacccaacaacaacaacaacaacatgtac
agcattcaaggcttacataatgagcgaaggaatgttttgaaaggacttcaagcactcatc
ggagacaaccatgatataaatggttcgttggtcgacggcactgatattactgatgctgaa
tggttctatgtgatgtcattgactcgatctttctctgtcggtgatggggttttaggcaag
gttcttagtactggctctttggtttggttaactggtgctcatgagttgcagtttaatgat
tgtgaaagagctcgagaagctcaattgcatggtatcggaacacttgtttgcataccaaca
aatcgtggtgttcttgaacttggatcttcggatatgattaaggaaaactgggaacttgtt
caacaagtgaaatccttgttcaggttcgatccaaacctaatctcgggttcaacccagttc
cttgagaggactatctcctttccagatatcggcttactagccggcattgaagaagaaaat
ggcggccctgataataaaaccatagaagatttaaagccagggcagcaatcttcttatgtg
gactcagagaattcagattccgatggtgcattacttgccgtgaataacaccgagaagatc
agaaccccaaagaaacgtggaaggaaacctggtctccgacgagatacaccagtgaaccac
gtggaagccgagaggcaacgccgtgagaagctaaaccataggttctacgctctccgagct
gcagtccctaacgtgtcgcgcatggacaaagcgtcgctgttatccgatgccgtcacgtac
ataaccgagctaaagtcaaaaatcgaagacttggaatcacagcttcggaaagtgtgtaac
gagaaagtgaaagtggaaaccattgacgccatggataaccaaagcacaaccacgtccgag
gaacaagcagcagccaggcctagcaattcatcatcggctgcaactgctaggtttagtgac
ctgcaactcgatgtcaaggttatgggaaacgatgatgcgatcatcagggttcaatcagag
aatgtgaactatcctggtgctaggttaatgtcagcacttcgtgacttagagtttcaagtc
caccatgcaagcatgtcgtgtgttaatgagcttatgctccaagacattattgcaaagatc
ccttatggattgacaagtgaagaagctattaaatctgctcttctccggaggctacatcag
tga
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