Gossypium arboreum (tree cotton): 108479136
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Entry
108479136 CDS
T05776
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1-like isoform X1
KO
K03255
protein TIF31
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gab03012
]
108479136
Translation factors [BR:
gab03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108479136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
CLU
TPR_9
TPR_MalT
TPR_8
DUF4533
Motif
Other DBs
NCBI-GeneID:
108479136
NCBI-ProteinID:
XP_052878550
LinkDB
All DBs
Position
12:91022941..91038941
Genome browser
AA seq
1899 aa
AA seq
DB search
MAPRNSRGKAKGEKKKKEDKLLPLAMDITVHLPDETHVILKGISTDKILDVRRLLSVKTE
TCHVTKFSLSHEVRGPRLKDAVDVSALKPCVLTLTEEDYDEEGAVAHVRRVLDIVACTTC
FGPSATAKDQIKPDASKNAPAAGEKGGVAAKKTAASTNKESLSKSPAKDVPVNIDGEMSH
SRPKLGSFYEFFSLSHLTPTLQFIRRTAKRHVEEIATDDHLFSLEVKLCNGKLVHVEACR
KGFYSVGKQQILCHNLVDLLRQLSRAFDNAYADLMKAFLERNKFANLPYGFRANTWLVPP
IAAQSPSNFPPLPTEDETWGGNGGGLGRDGKSDLIPWANEFSFIASMPCKTAEERQIRDR
KAFLLHSLFVDVAILRAIKAVKHVMEKLNPSSINNDEPLYSKRVGDLNIAVMKDASNASC
KVDTKIDGIQAIGYQKNLLERNLLKGITADENTAAHDISTLGVLNVRYCGYIATVKVERR
ENQQSSYPSQSIELEQPEGGANALNINSLRLLLHKTKPSEPNKPASPSKILEYEEPSSSQ
ISVEGLLEESIAKLEEEELKQEPFVRWELGACWIQHLQEQKNTEKDKKPSREKPKNEMKV
EGLGTPLRSLKNKKKADGNVGSGNSNSHPGAVEKVTGAPMESTLQTNSRDGELVLKSKLS
EEAFARLKESDTGLHCKSLQELIDLSQKYYTEVALPKLVADFGSLELSPVDGRTLTDFMH
TRGLQMRSLGHVVKLSEKLSHVQSLCIHEMIVRAFKHVVQAVIATVVNTDKMAESIASAL
NLLLGVPDNGELHKSCRIHSLVWKWLQLFLIKRYEWDISNLDFNEIRKFAILRGLCHKVG
IELVPRDFDMDSPTPFRPSDVVSLIPVHKVINSNHGTFSFFLLKFVSEFVDFIIDLYFIS
FQQAACSSADGRQLLESSKTALDKGKLEDAVTYGTKALSKLVAVCGPYHRMTAGAYSLLA
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALQYVKR
TLYLLHLTCGISHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGPDHIQTAA
SYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEA
ARNGTKKPDASIASKGHLSVSDLLDYINPNHDAKGKGIVAGKRRSFVMKVKGKVHPESSE
DSPKEAAKEDSDEEKQFSEQEDKPDANQWTSTVPLQPHAPVAEETTEAKINVDNHIHSEL
HAEGDDGWQPVQRPRASASHGGRRLKQRRATIGKVFSYQKKNVDPDVEFPLVKATNQNSR
FYLLKKRTISHGAYTEQHTMSPSQGSKFGRGIIRTVAYRVKSTPSSKSSAKVSGNGGEVL
NPSGGSASTFAPNDLRPTKNSLVSLGKSPSYKEVALAPPGSISKLHIRPETDCHDSQEAP
DRNAEHHQDEINEAKDSFDQVTTGTENISKEKNENALLDSTDSSKEEIDAVETKETRSPA
VMEDNSSLVETEREEGQELEVGGDEAGEVVQDGIYINCMPSSIDSPEKEFSEKDLSPSFE
PHSISSSALQGVEELKEKPLVLTSGNGQGLTNRKLSASAAPFNPSTPIPRAAPCPVNIVL
PPGPGPVPAIAPWPVNMPIHPASPPVLPNPACSSPHHPFPSPPPTPNMMQHLPFMYPPYS
QPQPVPTSTFPLTSSPFHPSQFSWQCNVGPSVPEFIPGTVWPGHPVEFPTTSRIVEPITD
QILEPKIQGDDSNPTSASMLPVDIETIGEAKEEVNISASEAINSADEVSRAGLESLQENG
HLNHCLDNSGNKPSQYNSPNKNAGGSAERKSDDEKTFSILVRGRRNRKQTLRMPISLLSR
PYGSQSFKLIYNRVIRGSEVPKTTGLYLSDNCTASASTT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaggaacagccgtggaaaagccaaaggagagaagaagaagaaagaagataag
cttcttccattagcgatggatattaccgtacaccttcccgatgaaacccatgttattctc
aagggaatatcaacggacaaaatcctagacgttcgtcgtcttttgtcggtaaaaaccgag
acctgccacgtcacaaaattttcgttatctcatgaggttagagggccgcggttaaaagat
gcggtcgacgtttcagcgcttaagccgtgcgttttaactttgacggaagaggactacgat
gaagaaggtgcggtggcgcacgttagacgggtgctggatatcgtggcctgtactacgtgc
tttggtccgtcggccactgccaaagatcagatcaagcctgacgctagcaagaatgcgccg
gctgcgggggagaagggcggtgtcgccgccaagaaaactgccgccagtacgaataaagaa
tctttgtcaaaatctccagcgaaggacgtaccagtcaatatagacggcgagatgagccat
tctcgtcctaagcttggctccttctatgaattcttttccctttctcatctcactcctact
cttcagtttataaggaggacggcgaagcgtcatgttgaggagatcgccactgacgaccat
ctcttctctctagaagttaagctttgcaatggaaagctggttcacgtggaagcttgccgc
aaaggattttatagcgttgggaagcagcagatcctttgtcacaatcttgttgatttgttg
cgccaactgagtagggcatttgataatgcatacgctgatctcatgaaagcatttttggaa
cggaacaagtttgcgaatcttccttatggctttagagccaatacatggcttgtacctcca
atcgcagcacaatcaccttcaaatttcccacctctccctacagaggatgaaacatggggg
ggcaatggaggcggtttaggaagagatggcaaaagtgatttgataccttgggccaatgag
ttttcatttattgcatctatgccttgcaagacagcagaggagaggcagataagggacagg
aaagcattccttcttcacagtctatttgtcgacgtggccattttgagagccattaaggct
gtgaagcatgtaatggaaaagctgaatccaagttcaataaataatgatgaacctctttac
tccaagagagtgggggacttgaatattgcagtaatgaaagatgcttcgaatgcaagctgt
aaggtggacactaaaattgatggtatccaagcaattggatatcaaaagaatttgctggaa
agaaacttattgaaagggatcacagctgatgaaaatacagctgcacacgacatttccact
ttaggtgtgctaaatgtgagatactgtggctatattgccactgtgaaagttgagaggaga
gagaatcagcaaagcagttatccatctcaaagcattgaacttgaacagcctgaaggcggg
gccaatgccctcaatattaacagtttgagattacttcttcacaaaacaaaaccttcagaa
cccaataagccagcttcaccttcaaaaattctggaatatgaagagcctagttcttcccaa
atttctgtagagggtttgctggaagaaagtattgctaaacttgaggaagaggaactcaaa
caggaaccttttgtgagatgggaactcggagcctgctggatacaacatttgcaggaacaa
aaaaacacagaaaaagataaaaaaccatccagggagaagcccaagaacgagatgaaggtt
gagggacttgggacacctcttaggtccctcaagaacaagaaaaaagcagatgggaatgta
gggtctggaaactcgaattctcatccaggcgctgttgaaaaagtaactggtgctcctatg
gaatctacgcttcaaaccaattcaagagatggtgaacttgtgttgaagagcaagttatct
gaagaggcctttgctcgacttaaagaatcagatactggacttcattgcaagtctttgcag
gaacttattgacttgtcacagaaatattacactgaagttgctcttccgaaattggttgca
gatttcgggtctttggaactctcaccagttgatgggcggacccttactgatttcatgcat
actagaggtcttcagatgcgttctctgggacatgttgtcaagctttccgaaaagctatcg
catgtgcagtcactttgtattcatgagatgattgttcgggctttcaagcatgttgtgcag
gcagtgatagccactgttgttaacactgataaaatggctgaatcaatagcttctgcactg
aacctactgcttggagtccctgataatggagaactacacaagtcttgcagaatccattcc
ctggtgtggaaatggttgcagctcttcttgataaagcgatatgaatgggatattagcaac
ttagatttcaatgaaatcaggaaatttgcaattctacgtggattatgccataaggtagga
attgagttggttccacgggattttgacatggattctcctaccccgttccgaccatcagat
gttgtaagcctgattccagtccataaggtgataaactcaaatcatggaacattttctttc
ttcctcctgaaatttgtttcagaatttgttgattttatcattgatttgtattttatttct
tttcagcaagcagcatgctcatctgctgatggaaggcaacttttagaatcatcaaaaaca
gccttagataagggaaaactcgaagatgcagtgacttatggaaccaaggctctgtcaaag
ctggtagcagtttgtggtccatatcatcgaatgacagctggggcttacagccttcttgct
gtagttttatatcacactggagacttcaatcaggccactatatatcagcaaaaagccttg
gatattaatgagagagaattaggactagaccatccagacacaatgaagagctatggagat
cttgctgtattctattacagacttcagcatacagaacttgctcttcaatatgtaaagcgt
actttgtaccttttacatcttacttgtggcatatctcatccaaatactgccgcaacatat
ataaatgtagccatgatggaagaaggcctgggcaatgttcatgttgccctcagatatcta
cacaaagctctgaagtgtaaccaaaggttacttggtccagaccatattcagacagcagca
agttatcatgctatagcaattgcgctctcattgatggaggcttaccctttgagtgtacaa
catgaacaaacaaccttgcaaattctccgagcaaagctgggccccgatgatttgcgtacc
caggatgctgctgcatggcttgagtactttgagtccaaggcatttgaacaacaagaagct
gctcgaaatggtactaagaagccagatgcatccatagctagcaagggccatctaagtgta
tctgatttgcttgactacattaatccaaatcatgatgccaaagggaagggtattgtggca
ggaaagagaagaagcttcgttatgaaggtgaagggaaaagtccatccagaaagctctgag
gattctcctaaagaagctgcaaaagaggattcagatgaagagaaacaattctctgaacag
gaagataaaccagatgctaaccagtggactagcactgtacctttgcagccccatgctcct
gttgcagaagagacaacagaggcaaaaataaacgttgataatcacattcattctgaatta
catgctgaaggggacgatgggtggcaacctgtccaaaggccaagagcatctgcttcacat
ggtggacggcgattaaagcagaggcgagcaactattgggaaggtttttagttatcagaaa
aagaatgttgatcctgatgtggaattccctcttgtcaaggccactaatcagaatagtagg
ttttaccttttaaagaaacgaacaatatctcatggagcttatacagagcagcacacgatg
agcccctcccaaggttcaaaatttggacggggaataatcagaactgttgcatacagggtt
aagtccactccatctagtaaaagttcagctaaagtctctggaaatggaggtgaggtgctt
aatccttcagggggatctgcttctacctttgcaccaaatgatctccgaccaacaaaaaat
tctctagtcagtcttgggaaatctccttcttacaaggaagtagctttggctcctccagga
agtatctccaaactgcatatcaggcctgaaactgattgccatgatagccaagaggcccca
gaccgcaacgctgaacatcatcaagatgaaattaatgaggcaaaagacagttttgaccag
gtgactacagggactgaaaacatatctaaagagaagaatgaaaatgctttgttggattca
acagatagttcaaaagaggaaattgatgcggttgaaaccaaagaaactaggtcacctgct
gtgatggaagataactcttccttggtggagactgagagagaggaaggacaagaacttgaa
gttggtggtgatgaggctggtgaagttgtacaggatggcatatacataaattgcatgcca
agttcaattgattctcctgaaaaggaattctctgagaaggatttgtctccaagttttgaa
ccccatagtatttcaagttccgcattacaaggggtagaagaattgaaggagaaacccttg
gtcctaacttccggtaacggtcagggactaaccaataggaagttgtctgcctctgcagct
cctttcaacccatcaacacccattcctcgtgctgcaccatgccccgtgaacatcgtcctt
cctcctggacctggacctgttccagccattgcaccttggccagtgaacatgcctattcat
cctgcatctcctcctgtcttaccaaatccagcatgctcttcccctcaccatccatttcct
tcacctcctccaactccaaacatgatgcagcatctaccctttatgtatccaccctattct
caaccccaacctgtaccaacaagcacctttcctctaactagcagcccttttcaccccagt
caattttcatggcagtgcaatgtgggccccagtgtaccagagttcattccggggacagtt
tggcctggtcatccagtggagtttcccacaacatcacggattgttgagccaattactgat
cagatattggaaccgaaaatccaaggtgatgattctaaccctacttcagcttcaatgctg
ccggtagatattgagactattggagaagctaaggaagaagtcaacatttcagcatctgaa
gcaataaatagtgctgatgaagtatctagagctgggttggaaagcctgcaggaaaatggt
catttgaaccattgtctagacaactctggaaataaaccaagtcaatacaacagcccaaac
aaaaatgctggaggcagtgctgaaaggaagagtgatgatgagaaaaccttcagcatttta
gtaagaggtagaaggaaccgaaagcagacgttgagaatgccaatcagtttacttagtcga
ccatatggctcgcagtcttttaaacttatatacaacagagttatcagagggagtgaagtt
ccaaaaactactggcctttatttgagtgataattgtacagctagtgcctcaaccacatag
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integrated database retrieval system
