Gossypium arboreum (tree cotton): 108479160
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Entry
108479160 CDS
T05776
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479160
Membrane trafficking [BR:
gab04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108479160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
108479160
NCBI-ProteinID:
XP_017637082
LinkDB
All DBs
Position
6:complement(100458962..100479703)
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AA seq
1843 aa
AA seq
DB search
MDGNVATNGNGGGGYRFRRIPRHSLAHLKLDPLLDDNLEQWPHLTELIQCYKSDWIKDDN
KYGHYESISPDSFQNQIFEGPDTDIETEMQLASARQIKAEDATDDDLPSSSGRQFPNSNV
TKHFGQSPLPAYEPAFDWGNERSMIFGQRIPETPTTHYGSGLKISVKVLSLSFQAGIVEP
FYGTMCIYNRERREKLSEDFYFSVLPSEMQDAKVSLEPRGIFYLDAPSASICLLIQLEKP
ATEEGGVTPSVYSRKEPVHLTERERQKLQVWSRLMPYRESFAWAIVPLFDNSIAAASGGS
ASPSSPLAPSMSGSSSHEGVFEPIAKVTSDGKLGCSSGSSVIVEISNLKKVKESYTEESL
QDPKRKVHKPVKGVLKLEIEKHQTALAELDNISEGGSATNDSLDAGEPVADLMFSRSPGN
GLDGPQTSNSKWIAIDGKEVSGNGSNSHGNLDLCADDFQAFDFRTTMRNEPFLQLFHCLY
VYPLTVNLSRKRNLFIQVELRKDDADARRQPLEAIHPRDRGSSHQKYAHTQVAVGARVAC
YHDEIKVSLPAVWTPSHHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTHAQLRSEISLP
IIRELVPHYLLDSGKERLDYLEDGKNVFKLRLRLCSSLYPINERIRDFFLEYDRHTLRTS
PPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQ
QESVDDSERNRSLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVL
AMAWFFLELIVKSMALEQTRLFYHSLPLDEDVPPMQLKEGVFRCIIQLYDCLLTEVHERC
KKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQSVLHDCKLIFLQII
CDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHDDLSQRAKAARILVVVLCKHEFDARY
QKPEDKLYIAQLYFPLIGQILDEMPVFYNLNAAEKREVLIVILQIVRNLDDASVVKAWQQ
SIARTRLFFKLMEECLVHFEHRKPADGMLIGSSSRNPVGDAPTSPKYSDKLSPAINNYLS
EASRQEVRPQGTPENGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHP
ILRQKLELWEENLSAAVSLQVLEISEKFSAMAASHSIATDYGKLDCLSSIIMSFFSRNQP
LVFWKAFLPVFNNVFDLHGATLMARENDRFLKQVAFHLLRLAVFRNDNIRKRAVIGLQIL
VRSSFYFMQTARLRVMLTITLSELMSDMQVTQMKSDGTLEESGEARRLRKSLEEMADEVK
SSGLLKECGLPEDALLVTPENFKENRWSWSEVKSLSGSLLLALDASLEHALLGSVMSMDR
YAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARN
DGVWSKDHVTALRKICPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAE
LYHFCASILELVIPVYKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFY
GERFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKAEELQPG
VCYLQITAVDPVMEDEDLGSRRERIFSLSTGTVRARVFDRFLFDTPFTKNGKTQGGLEDQ
WKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGD
QLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCK
RAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaacgttgctaccaatggcaacgggggcggtgggtatcgctttcggagaatt
cctcgacattcgctcgctcatctcaagctggatccattgcttgatgacaatttggagcag
tggccacatctaaccgaactcattcagtgctacaaaagcgattggattaaagatgataac
aaatatggccactacgaaagtatcagtcccgattcattccagaatcagatatttgaaggt
ccagatactgatattgagactgaaatgcagcttgccagtgctagacaaattaaggctgaa
gatgctaccgatgatgacttgccaagttcctcaggaaggcaatttcccaactctaatgtt
acaaagcattttggtcagtctcctctcccagcttatgaacctgcttttgactggggaaat
gaaaggtcaatgatatttggccaaaggatcccagaaacccctaccacacactatggcagt
gggttgaagatctctgtcaaagttctatcgctttcctttcaagctggaattgttgagcca
ttctatggaaccatgtgcatatataatcgggagagaagagaaaaattatctgaagatttt
tatttttctgttcttccaagtgaaatgcaggatgctaaagtgtctttagaacctcgtggg
atattctatttagatgctccatcagcatcaatctgtttgctaatccagttagagaagcct
gcaacagaagaaggcggtgtaaccccttcggtttattcacgtaaagaaccggtgcacttg
actgagagagagaggcagaagctgcaggtgtggtctcgtctaatgccttacagagagtct
tttgcctgggccattgttccattatttgacaatagcatcgctgcagcttctggtggatct
gcttctcccagcagtcctcttgctcccagcatgtctggttcaagttctcatgagggtgta
tttgagcccattgctaaggtcacatcagatgggaaactgggttgctcaagtggtagttct
gttattgttgaaatatctaatctaaaaaaagtgaaggaaagctacactgaagagtcactt
caggatcctaaacgaaaagtacataaacctgtaaaaggtgttctgaaattggaaattgag
aaacaccagactgctcttgctgagctggataatatatcagaaggtggcagtgcgacaaat
gattccctggatgctggggagccagttgctgatttaatgttttcaaggagtcctggaaat
ggtctggatggtcctcagactagcaactccaagtggatcgcaattgatgggaaagaggtt
tctggaaatggatctaacagtcatggaaatctagatttatgtgcagatgattttcaagct
tttgacttccgcacaacaatgagaaatgagccattcttgcagctttttcattgtctatat
gtgtatccgttaactgtgaatttgagtcggaaaaggaatctattcatacaagttgagcta
agaaaggatgatgctgatgctcggaggcagcccttagaggcaatccatccaagggatcgt
ggttcatcacaccagaaatatgctcacacacaagttgctgttggtgctagggttgcctgc
tatcacgatgagattaaagtttcacttcctgctgtctggacaccatcacatcacctgtta
tttacttttttccatgttgatcttcaaactaaacttgaagctccaaaaccagtagttata
ggatatgcagcacttccattatcgacacatgcccaattgcgatctgaaatttctttaccg
ataataagggaattggttccacattatctcctggattctggcaaggagaggttggattat
ttggaagatggaaaaaatgtattcaaattgcggttaagactttgttcatctctatacccg
attaatgagcgcatcagagatttttttcttgagtatgatagacacactcttcgaacaagc
ccaccttggggttctgaacttttggaggcaattaacagcttaaagaatgtcgattccact
gctttgcttcagtttcttcacccgattctaaatatgcttctccatcttatagggaatggt
ggagaaacccttcaggttgctgcattcagagccatggttaatatcctgacaagggtgcag
caagagtcagttgatgattctgaacgaaatcgctctctagttaactatgtagattatgct
ttcgatgactttggtggtcgtcaacccccagtttatccgggcttgtctactgtgtggggt
agcttggctcgtagtaaggctaagggttatcgtgttggaccagtgtatgacgatgtgctg
gcaatggcttggttttttcttgagctaattgttaagtcaatggcattggagcaaacacgt
ctgttctatcatagccttccattagatgaagatgttcccccgatgcagttgaaagagggt
gtgttcagatgtataatccagctgtatgattgccttctaactgaagttcatgagcgttgt
aagaaagggctaagcttggcgaaacgattgaacagcagtctggcattcttttgttatgat
cttttatccattattgagcctcgccaggtttttgaattggtgtccttgtatctggacaag
ttttctggggtatgtcaatcagttctgcatgattgcaagctaatttttctgcagataata
tgtgatcatgatctttttgtggaaatgcctgggagagacccctcagacaggaactatctt
tcatctgtcttgattcaagagcttttccttacttgggatcatgatgatttatctcagcgt
gctaaggcagctagaattttggtggttgttttatgtaagcatgagtttgatgctcggtac
caaaaacctgaagacaagctgtatattgctcaactatattttcccctcattggccagatt
ctagatgaaatgcccgtattttacaacttaaatgctgccgaaaagcgtgaagttttgatt
gttatcttgcaaatcgtgcggaatctggatgatgcatcagttgttaaggcttggcagcaa
agcattgctcgaactagattatttttcaaactcatggaggaatgcctggttcattttgag
caccgaaagcctgctgatggaatgcttataggaagcagttctcgcaatcctgtgggtgat
gcacctacatcaccaaagtattctgataagctttctcctgcaatcaacaattatttatct
gaagcatcgagacaagaagttagacctcagggaactcctgaaaatggttacttgtggcag
agggtgaattctcagctgagctcccctagccagccatattccttgagagaagctctggct
caggcccaatcttctaggattggagcttcagcccaagcacttagagaatctttgcatcca
attttgcgacaaaaactggagctttgggaagaaaacttgagtgctgctgttagtcttcag
gttttagaaatatctgagaaattttctgcaatggcggcatcccatagcattgctactgat
tatggaaaacttgattgtttatcatctataattatgagcttcttttcccgaaatcagcca
ctggttttctggaaagcttttctgcctgtcttcaacaatgtatttgatcttcatggggca
acgctaatggctagggagaatgatcgtttcttaaaacaagttgcctttcatctacttcga
cttgcagtctttcgaaatgataatattaggaaaagagctgttattgggcttcagatactc
gtgaggagttcattctacttcatgcagactgcaaggttgagggtaatgctgactatcacc
ttgtccgagctaatgtctgacatgcaggtgactcagatgaagtctgatgggacacttgag
gaaagtggtgaagcacgaaggcttcgaaaatctttagaggaaatggcagatgaagtcaag
agctctggccttttgaaggaatgtggacttcctgaggatgctctattggtaactccagaa
aattttaaagagaatagatggtcctggtcagaagtaaaatctctctctggcagccttctt
cttgcccttgatgctagtctggagcatgcactgttgggctctgtaatgtccatggataga
tatgcagcagcagaaagcttttacaagcttgcaatggcatttgcccctgtcccagatctt
cacataatgtggttgctgcatttgtgtgatgcacatcaagaaatgcagtcttgggctgaa
gctgcacagtgtgctgtggctgttgctggtgttgtaatgcaggctcttgttgctagaaat
gatggtgtttggagcaaggatcacgtgacagccttacgtaaaatttgtcctatggtcagc
agtgaaatcacatcggaggcatcagcagctgaggttgagggatacggtgcttcgaagctc
actgttgactctgctgttaagtacctacaacttgcaaataaacttttctctcaagctgaa
ctctatcatttctgtgcaagcattttggaactcgttattccagtttataagagcagaaga
gcatatggacaactggctaaatgtcatacattgctcacaaacatctatgaatcaatcctt
gagcaggagtcaagccctatccctttcactgatgctacttactatagggttggattttat
ggtgagagatttggtaagctggaccggaaagaatatgtttaccgagaacctcgtgatgtg
cgcttgggtgatataatggaaaaacttagtcatatatatgaatctaggatggatggtaat
catacattgcacattattcctgattccagacaggtgaaggcagaggagttgcagcctgga
gtctgttacctgcagataacagctgttgatccagtcatggaagatgaagatttgggaagc
agaagggaaagaatcttttctctttctactggaactgtccgtgcacgtgtttttgaccgc
ttcttatttgacactccattcacgaaaaatggcaagacccaaggtggattggaagaccaa
tggaaaaggaggactgttcttcagactgagggctcattccctgcacttgtcaataggctc
ttggtgataaaatctgaatcacttgaattttctccggttgagaatgcgattggaatgatt
gaaactcgaacagcagccctacgaaatgagttggaagagcctcgtagttccgaaggagac
caactgcctcgtcttcagagcctgcaaagaattcttcaaggcagtgttgcagttcaagtg
aatagtggtgttctgagtgtgtgcacagccttcttgtctggtgaacctgccacaaggttg
cgttctcaggagctacagcaacttattgctgcactccttgaatttatggctgtttgcaag
cgggcaattcgtgtacacttcagactaataggagaagaagaccaagatttccacacacaa
ctagtgaatggatttcaatctctcacagcagagctatctcattacatccctgcaattcta
tcagagctctga
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integrated database retrieval system
