Gossypium arboreum (tree cotton): 108479169
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Entry
108479169 CDS
T05776
Name
(RefSeq) protein argonaute 1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108479169
03036 Chromosome and associated proteins [BR:
gab03036
]
108479169
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
108479169
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108479169
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
108479169
microRNA pathway
RISC loading complex
108479169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
108479169
NCBI-ProteinID:
XP_017637100
LinkDB
All DBs
Position
12:119606625..119613756
Genome browser
AA seq
1059 aa
AA seq
DB search
MGRKKRSDNPSGGESSQSHDTGAGSGQGPQRPPQQQGGSGGYSGGRGWAPQSQQGGRGGY
GSGGRGRGMPQQQYGGGPPEYQGRGRGGSSQQGGRGGYGGGRGSGGRGGGPFAGGPSRPP
VPELHQATQPMQVEVTRQPAPSEAGSSSRPPPEPVPLAEHYQQLSIQQEAGQAIQPVPPS
SKSVRFPLRPGKGSTGTRCIVKANHFFAELPDKDLHQYDVTITPEVASRGVNRAVMEQLV
KLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFKITLTDEDDGSGQPRRDRDFKVVIKL
AARADLHHLGLFLQGKQADAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGE
GLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSRPLSDADRVKI
KKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDDRGTMKSVVEYFHETYGFIIQ
HTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQEREYDIMK
TVQHNAYHEDPYAKEFGIKISEKLASVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNK
KMVNGGTVNNWICINFSRLVQDSVARGFCYELAQMCYISGMAFTPEPVLPPISARPEYVE
KVLKTRYHDAMIKLQPQNKELDLLIVILPDNNGSLYGDLKRICETDLGIVSQCCLTKHVF
RMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPS
IAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGMIKELLISFRRA
TGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLF
ANNHSDRRSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKF
TADALQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGTAAG
RGGGAAAAGGRSTRGPGASAAVRPLPALKENVKRVMFYC
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggaagaagagaagtgataatccttctggaggcgagagctcccagtctcatgat
actggtgctggcagtggtcagggtccccaacgtcctcctcaacaacaagggggaagtgga
ggttactcgggtggacgaggttgggctccacaatctcagcaaggaggtcggggtggttat
ggctctggtggtcggggtcgtggaatgccacaacagcagtatggtggaggacctcctgaa
taccaaggtagaggaaggggaggttcttctcagcaaggaggtcgtgggggatatggtggc
ggtcgaggtagtggtggccgtggtggaggaccttttgctggtggaccatcccgaccacct
gttcccgagctgcaccaagcaacccaacctatgcaagttgaggtgacccgccagcctgct
ccgtctgaggcaggctcatcatccaggccaccacctgagcctgtaccattggctgagcat
tatcaacagctttccatccagcaagaagctggccaagcaattcagccagttcctccatca
agcaagtcagtgaggtttcctcttcgacctggaaagggtagcactggcacaaggtgcatt
gtcaaagctaatcatttctttgctgaattgccagataaagatttgcaccagtatgatgtt
actattacaccggaggtagcatctcgaggagtaaaccgggctgtcatggagcagctagtg
aaattatatagagaatcacatctaggaaagcgccttcctgcttatgatggccggaagagt
ctttacactgctgggcctctcccttttgtgtccaaggagtttaagatcacccttactgat
gaggatgatggttcaggacagccaagaagggaccgggattttaaagttgtaatcaaattg
gctgctcgtgctgatctgcaccatcttggactctttttgcaagggaaacaagctgatgca
cctcaggaagctcttcaggttcttgacattgttcttcgagaattacctactaccaggtat
tgtcctgttggacgttcattctactcacctgacctagggagaaggcagcctttgggtgag
ggattagaaagctggcgtggtttttatcaaagcattcgtcctacacagatgggactatcg
ctgaatattgatatgtcttctactgctttcattgagcctttgcctgttattgattttgta
acacaattgctaaaccgtgatgtttctagaccactatctgatgctgatcgcgtgaagatt
aaaaaggctcttagaggagtcaaagtagaagttacacaccgtggcaacatgcggagaaaa
tatcgaatatcaggtttaacatcacaagcaactagagagttgacttttcctgtagatgat
agaggcacaatgaaatctgttgtggagtattttcatgaaacttacggtttcatcattcaa
catacccaatggccttgtctacaagttggaaaccagcagagaccaaattatttgccaatg
gaggtatgcaagattgttgagggtcagaggtactcgaagagattgaatgagaaacagatt
actgctttactgaaggtcacctgccagcgtcctcaggaaagagagtatgatattatgaag
acggtgcaacataatgcttatcatgaagacccttatgctaaggaatttggaattaaaatc
agtgagaagcttgcttcagttgaagcgcgtattctgcctccgccgtggcttaaatatcat
gatactggtagagagaaggattgcctgcctcaggttgggcaatggaatatgatgaacaag
aaaatggttaatggtgggactgtaaacaactggatctgcataaacttttctcggctagtc
caagatagtgtggcacgggggttttgttatgagcttgcacaaatgtgttatatctctggc
atggcctttactcctgaaccagtgcttcctccaattagtgctcgtcctgagtatgttgag
aaggttttgaaaacacggtatcatgatgccatgattaaactgcagccccagaacaaagag
cttgacctgcttattgttattcttccagataataatggctctctttatggtgatttgaaa
aggatttgtgagactgatcttggtattgtttcccagtgctgcttgactaaacatgtattt
agaatgagcaaacaatatttggccaatgtggccttgaaaattaatgtaaaggttggggga
agaaatactgttcttgttgatgcaatatcacgaaggatacctcttgtcagtgaccgtcca
actataatttttggcgctgatgttacccatcctcaccctggggaggattcaagcccttct
attgcagctgttgttgcctctcaagattggccagaggttacaaagtatgctggcctggtt
tgtgctcaagctcatcgtcaggagctcatccaagatttattcaagacatggcaggatccc
gtaagggggactgtttctggtggcatgattaaggagctcctaatatctttccgacgagcc
actggacagaagccacagcgcattatattctacagggatggtgtcagcgaaggccagttc
tatcaagttctgttatatgaacttgatgctattcgtaaggcatgtgcctcgttggagcca
aattatcagcctcctgttacttttgttgtggtgcaaaaaaggcatcatacaaggttgttt
gctaacaatcatagtgatcgccgttctgtagacaggagtgggaacattttgcctggcact
gtggtggactccaaaatttgtcacccaacggagtttgacttctacctatgcagccatgct
gggattcagggtacaagccgtccagctcattaccatgtgctatgggatgagaacaagttt
acagctgatgcattacaatctctcacaaataacctttgctatacatatgcaaggtgcaca
cgatcagtgtctattgttccccctgcgtactacgcacatcttgctgcattccgagctcgg
ttttatatggaaccagaaacatcagacagtggatcaatgacaagtggcacagctgcaggg
cgtggaggtggagctgcagctgctggtgggcgtagcacaagaggacctggtgctagtgct
gccgtcagacctctgcctgccctcaaggaaaatgtcaagcgtgttatgttctactgttaa
DBGET
integrated database retrieval system
