Gossypium arboreum (tree cotton): 108479210
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Entry
108479210 CDS
T05776
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108479210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108479210
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108479210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
108479210
NCBI-ProteinID:
XP_017637163
UniProt:
A0A0B0MM47
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Position
12:4828376..4836899
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AA seq
903 aa
AA seq
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MEPPLPVLPTNYGISNEFCSKGCKRTRLSSDSKDYDSTISAANPQDGNEKKKPKVSPNAI
DFSDPLAYAKMLETFNTGGKYGSVTKDLEALISRNTQLVSKVLALHPRLSNMSADVEKTP
RKEASKVPSRQLSHLSRNNFIDLEDDSIGNDITSSVSPVVILDSDDEDNRNPRSLHPVQE
IVLRKPSGNLIYKEIKVGEPNLFQFGESMGNRVYKEEKISLTSEFDIKKDKGIYVGVEDD
VDAQTENEDDGLGDIWQEMSMALEFSKDAIEDPSNEHMPEDDEDCDHSFVLKDDLGYVCR
ICGVIQRGIETIIDIQYNKAKKSTNAYALEPRNGKNRESIETGVKFSEDDLAVTDITAHP
RHMKQMKPHQVEGFNFLLSNLVADNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPL
VVLPKGILATWKKEFETWQVEDIPLLDFYTVKADNRSQQLDVLKKWVECKSILFLGYKQF
STIICDGGTSQTSISCREILLRAPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGT
LYQNHVKEVFNILNLVRPKFLRLDTSKSVIKRIMSKVHIAGVKKQLKAGADAAFYDLVEH
TLQKDENFERKVSVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLSLGPRQKDEVHKL
RRFQRKFKISSVGSAVYLHPKLNSFSENSDTTDDKMDELLNTLDVREGVKAKFFLNMLNL
CESAGEKLLVFSQYLVPLKFLERLSVKVKGWQPGIQVFSITGESSSDHREWSMDRFNNSP
DAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVYAYRLVAG
DSPEEEDHSTCFKKELIAKMWFEWNKYCGNRDFDMETVNLNECNDLFLESQLLREDIRDL
YRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagcctccgctgccggttttgcctacaaattacggaatctcaaacgaattctgttct
aaaggttgtaagaggacaagattatccagtgattcaaaagattatgacagcaccatctct
gctgcaaatcctcaagatggcaatgaaaagaaaaaacctaaggtctccccgaatgcaatt
gatttcagtgacccacttgcatatgctaaaatgcttgaaacttttaatactggtggtaaa
tatggaagtgttacaaaagatttagaagcccttatttctaggaatacacaattggtaagc
aaggtacttgctttgcatcctcgtctttcaaatatgtcggcagatgtggaaaagaccccg
aggaaagaggcttcaaaggtcccaagtcgacaactttcccatttgtcacgaaacaatttt
atcgacttggaggatgactctattggaaatgacatcacatcgtcggtgtcaccagtagtg
attctggattcagatgatgaagacaatagaaatcctagatctctacatccggtccaggaa
attgtattgaggaagccatctgggaatttaatctataaagagataaaggttggagagcct
aatttgtttcagtttggggagtctatgggcaaccgagtttacaaggaagagaagattagt
ctgaccagtgaatttgatatcaagaaggataaaggtatttatgttggtgttgaagacgat
gttgatgctcaaacggagaatgaagatgatggtctgggagatatttggcaggagatgtca
atggcattagaattctccaaggatgctattgaggatccttcaaacgagcacatgccagaa
gatgacgaagattgtgatcattcttttgtcttgaaggatgatcttggttatgtatgtaga
atttgcggggtcattcagagaggaattgagactataattgacatccaatataacaaggcc
aaaaagagcacaaatgcttatgcattagagcctcgaaatggcaaaaatagagagtcaatt
gaaactggagttaagttctctgaagatgatttagcagtaaccgacataactgcgcatcca
aggcatatgaagcaaatgaaacctcatcaagttgaaggctttaattttcttctgagcaat
ttggtggcagataaccctgggggctgcatcttggcacatgcccctggttctggaaaaaca
tttatgataatcagcttcatgcagagtttcctagccaaatacccacatgctaaaccacta
gttgtgcttccaaaaggcatcttggctacatggaaaaaggagtttgaaacatggcaagta
gaggatattccactgcttgatttttatactgtgaaagcagataatagatctcagcaattg
gatgttttgaagaagtgggttgagtgcaaaagtatcctttttctgggatacaagcagttc
tctaccataatttgtgatggtggaaccagccagacttctatatcttgccgagagatactg
ctcagagcaccttcaattttaattttggatgaaggccacacaccgaggaatgagaacacc
gatgtgctacaatcccttgcaaaagtgcaaacagctcgaaaagtggtgctttcaggaact
ctttatcaaaatcatgttaaagaggtatttaacatattgaaccttgttcgaccaaagttt
cttaggttggatacttcaaaatcagtaattaagcggataatgagcaaggtgcatatagct
ggggtgaagaagcagttaaaagctggagcagatgcggctttttatgatttggtggagcac
acactgcagaaagatgaaaattttgagagaaaagtctcagtcatccatgatctgcgtgag
atgaccagcaaagttcttcattactataaaggtgatttcttggatgagcttcctggactt
gttgatttcactgttgtgctgagtcttggtcctagacagaaggatgaagttcacaagtta
agaaggtttcaaaggaaattcaagatttcatctgttggtagtgctgtttatctccatcca
aaacttaattctttctctgagaattctgacacaacagatgataagatggatgagctgtta
aacacattagatgttagagagggcgtcaaagcaaaattttttcttaatatgttaaatttg
tgtgagtcagctggtgagaaactccttgtttttagtcagtatcttgtccccttgaaattt
ttagagagattatccgtgaaagtgaagggttggcaaccaggaattcaggttttctcgatc
acaggtgaatcaagctctgatcatagggagtggtctatggatcgcttcaataactctcct
gatgccaaagttttctttggatctataaaggcatgtggagagggaatttctttggtgggg
gcatcccgaattatcattttggatgtccatcttaatccatctgtgacccgccaagcaata
ggtcgtgcttttcgccctggccaaaagaagaaagtgtacgcgtatagattggttgcaggg
gattctcctgaggaggaggatcatagtacttgtttcaagaaggaattaattgcaaaaatg
tggtttgagtggaacaagtattgtggtaaccgagattttgatatggagactgttaatttg
aacgagtgcaatgatctctttttggaaagtcagttgttaagggaagacattagggatctg
tacagaaggtag
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