Gossypium arboreum (tree cotton): 108479218
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Entry
108479218 CDS
T05776
Name
(RefSeq) RINT1-like protein MAG2
KO
K20474
RAD50-interacting protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479218
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
108479218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
TIP120
Motif
Other DBs
NCBI-GeneID:
108479218
NCBI-ProteinID:
XP_017637171
LinkDB
All DBs
Position
12:107876529..107880868
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AA seq
796 aa
AA seq
DB search
MDSLQGLPPLSTLSTSVSSTLNAKLGTNHDLTQAPSIVAEFLTQCDDLERNLVHLNRTLE
SNLASYASFSNRIGHLFGIVNSKLIDLGSSVCLRSSVSDGQGLGEELPSLAKEVARVEAV
RAYAEVASKLDNLIGDIEDAVSSTMNKNLRKDSSAQNSEETRMVAIKILKVTEDLLTSVT
KARPQWACLVSAVDHRVDRSLAILRPQAIADHRALLTSFGWPPSLSNLTSSSLDARKSSE
VPNPLFTMHGDLKRRYCENFFALCRLQELQRQRKSRQLEGHNREVALHQPLWAIEELVNP
VSVACQCHFSKWIDKPEFIFALEYKITRDYVDSMDELLQPLVDEAMLTGYSCKEEWISAM
VTSLSTYLAKEIFPIYIGQLEEESVTGIRSQARTSWLHLIDLMVSFDNRIKPLVEKSGIL
LSLLEDGTPRKISSLSVFCDRPDWLDMWAEIELDDAMEKLKPEIDEERNWTKKVQGADLS
NSDDYKSPAVSSITFTCLSSLIERCRLLPTVSLRSRFLRLTSTPVINFFLDCLLLRCQEA
EGLTALTDDDALIKVSNSVNAAHYSESILKEWCEDVFFLEMGLDQGEHPGESVAEYSGRE
VPIEEYGNGIFHEEIAKFEDFRTQWVEKITMVILRGFDARCRDYIKNRRQWQEKSEEGWT
VSQTLIGALDYLQAKMALMEENLNRVDFAGIWRSLAAGVDKLIFNGILMSNVKFQEEGVE
RFGYDVEVVWGVFRAWCLRPEGFFLKVSESLKLLKMEKEQLEDSLKGGQKRMKENGIRHL
SVAEVEKIGKNRVYTK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggactctctgcaaggtctccctccactatcgactctgtccacctcagtttcctctacc
ctcaacgctaaactcggcaccaaccatgatctaacccaagcaccaagtatcgtcgccgag
tttctgactcagtgcgatgatctggaacgaaatctagtccacctcaaccgcaccctcgag
tcaaacctcgcatcttacgcttccttctctaatcgcatcggccacctcttcggcattgta
aattcgaaattgatcgatctaggttcctccgtttgccttcggtcctccgtttcagacgga
caagggttgggagaggagttgccgtcgttggccaaggaggtggccagagtggaagcggtc
cgggcatatgcagaggtagcatcaaaactggataatttaattggtgatattgaagatgct
gtctcttctactatgaacaaaaatttaagaaaggattcttccgcacaaaattcagaagag
acccgcatggttgctattaaaatactcaaagtgaccgaagacttgttaacttcagtcacg
aaggcacggcctcaatgggcatgtctagtctcagctgttgatcacagagtagatcgatct
ctagcaatattaagaccccaggcaattgctgatcaccgagcccttctcacatcctttgga
tggccaccatcactttcaaatttgacttcctcaagtctggatgcaaggaaatcaagtgaa
gtcccaaatcctcttttcacaatgcatggtgatctcaaacgtcggtattgtgaaaacttt
tttgccctgtgccgcctgcaggagttgcagagacaaagaaaatcacggcaacttgagggc
cataatcgggaggtcgctcttcaccaaccactttgggcaattgaagagcttgtcaatcct
gtctctgttgcatgccaatgccacttttcaaagtggattgataaaccagaattcattttt
gctctggaatataaaattacacgggattatgttgattcaatggatgagttattgcagcca
ttggttgatgaggcaatgctaactggttacagttgcaaagaagaatggatttctgcaatg
gtaacatccttatcaacatatttggcgaaagagatattccctatttatattggtcaactg
gaggaagagagtgtgactggtattagatcacaggctaggacatcttggctccatcttatt
gacttgatggtctcttttgacaaccggataaagcctcttgtagaaaaatctgggatcttg
ctttccctcctggaagatgggactccgcgtaagatttcatctctatctgtgttctgtgat
cgacctgactggcttgatatgtgggcagaaatagagctagatgatgcaatggaaaaacta
aaaccagagatagatgaagaaagaaactggactaagaaggttcagggggcagatctctct
aattctgatgactataaatcccctgcagtttccagcattacttttacttgtttatcatct
ttgattgagcggtgtcgattgttgcctacagtttctctgaggtcaaggtttctgagatta
actagtacaccagtcataaatttttttttggattgcttacttctcagatgccaagaggct
gaaggattgactgccttaactgatgatgatgctctaatcaaagtttcaaactctgtcaat
gcagctcactattccgaatctattttaaaagaatggtgtgaggatgtctttttccttgag
atgggattggatcaaggtgagcatcctggagagtctgttgctgaatatagtggtcgcgag
gttccaattgaagagtatggaaatggtattttccatgaggagattgcgaagtttgaagat
ttcagaacacagtgggttgagaagataactatggttattttaagaggatttgatgcccga
tgccgagattacataaagaacagaaggcaatggcaggaaaagagtgaagaaggttggact
gtatcacaaacattgataggggccctggattatttgcaggcgaaaatggcactaatggaa
gaaaatttaaacagggtagactttgcgggaatctggaggagcctggcagcgggggtggat
aaattgatatttaacggcattcttatgagcaatgtgaagttccaagaggagggggtggag
agatttgggtatgatgtagaggtggtatggggagtatttagggcatggtgtttgaggccg
gaaggattctttctgaaggtgagcgagagcttgaagttgttgaagatggaaaaggagcaa
cttgaagacagcctgaaaggggggcagaaacggatgaaggagaatggaattaggcatttg
agtgtagctgaggtagaaaagattgggaaaaacagagtatataccaagtaa
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