Gossypium arboreum (tree cotton): 108479392
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Entry
108479392 CDS
T05776
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
gab
Gossypium arboreum (tree cotton)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
AAA_30
AAA_19
CMS1
YgbB
ERCC3_RAD25_C
Cas3-like_C_2
zf-CCHC_2
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108479392
NCBI-ProteinID:
XP_017637445
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Position
11:122962686..122968166
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AA seq
750 aa
AA seq
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MASIHQTPSLEVSSSAANTRKITPPTPSTSRFSLPFTFKSQFNALVVGGRPLLGGFNHSS
VPRAVATPNSVLSEQAFEGLSLHQENDDVYDSEGEVGSGFESESTLDDELDLSKLGLPQR
LVDSLLKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKQITEDEGQRT
RRVSGRLPRVLVLAPTRELAKQVEKEIKESASYLNTVCVYGGVSYNLQRNALSRGVDVVV
GTPGRIIDLIESKDLRLGEVEYLVLDEADQMLAVGFEEAVEEILENLPSKRQSMLFSATM
PSWVKKLARKYLDNPLNIDLVGDGDEKLAEGIKLYAISATATSKRTILSDLITVYAKGGK
TIVFTQTKRDADEVSMALTSSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRG
LDIPNVDLVIHYELPNDAETFVHRSGRTGRAGKEGSAILMYTNSQRRTVKSLERDVGCRF
EFISPPSMEEVLESSAEQIIATLNGVHPESIKFFTPTAQRIIEEQGTSALAAAIAHLSGF
SSPPSSRSLISHEQGYVTLQLTRDSTYSRRVLTARSVTGFLSDVYPAAADEVGKIHLIAD
ERVQGAVFDLPEEIARELLDKETPPGNTIKKITKLPPLQDDGPSSDFYGKFSSRDRFSSR
DRFPRGGSKERRGGSRTPRGWGNGRDSDNEFQGGRSSWSRASKSSRDDWLIGSGSRSTRS
PARDRNFGGSCFNCGRSGHRASDCPEKVDF
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcctccatacatcaaaccccatcactggaggtctcctcttctgccgctaatacaaga
aagataacaccacccactccttcaacttctcgtttctctttgccctttacttttaagtct
cagttcaacgccttggtagtcggtgggaggccattgcttggtgggtttaaccactcttct
gttcctcgtgccgttgccactcccaattcagttctcagcgaacaagccttcgagggtctt
tcgcttcaccaagaaaacgacgacgtttatgactccgagggtgaggttgggagtgggttc
gagtctgagtctaccctcgacgatgaactcgacctttccaagttgggtttgcctcagcga
ctcgttgattcacttctcaaacgtggcatcactcaccttttccccattcagagagctgta
ttggtaccggcactgcaaggtagagacatcattgctcgtgcaaaaactggaactggcaag
acattagcctttgggattcctataattaaacaaattactgaagatgaaggccaacgtaca
aggagggtgtcgggtcggctgccaagagttttggtcttggctccgactcgggagttagcc
aaacaagtggagaaagaaattaaggagtcggcgtcttatttgaacacggtttgcgtttat
ggaggggtttcttataatttgcagcgaaatgctctttcccgtggggttgatgtagtggtc
ggaactcctggtcgaatcattgatctgatcgaaagtaaagacctcagattgggggaagtt
gaatatctggtccttgatgaagctgatcagatgcttgctgttggatttgaggaggctgtt
gaagagattttagaaaatctaccatcaaagaggcagagcatgcttttctctgcaaccatg
ccttcttgggttaaaaagttggcaagaaaatacttggacaatcctctaaatattgacttg
gttggagacggagatgaaaaacttgctgaagggatcaaactttatgcaatatcagccact
gcaacttcaaagcggaccattcttagtgatcttataacagtttatgcaaagggtgggaaa
accattgtctttacacaaacgaaacgagatgctgatgaagtgtctatggctttaacaagt
agcatagcttctgaggcattgcatggggatatatctcaacatcagagggagagaacattg
aatggatttcggcaaggaaaattcactgtgcttgttgccactgatgttgcatctcgtgga
cttgatattccaaatgttgatttagttatccactatgagcttcccaatgatgcagagact
tttgtgcatcgctctggacgaactggacgagcagggaaggaaggttctgcaattttaatg
tatactaacagccaaaggaggactgtcaaatctcttgaacgtgatgttggatgtaggttt
gagttcattagtcccccatctatggaagaagttctagagtcatcagctgagcaaataatc
gcaactctaaatggagttcatcctgagtctataaagttctttaccccaactgctcaaaga
ataatcgaagagcaagggacaagtgcacttgctgctgcgatagcacacctaagtggattt
tcctctcctccttcgtcccgatctcttattagccatgagcagggatatgtaacactgcaa
ttgacaagagattccacttattctagaagggtcctgactgctaggtctgtcactgggttt
ctttctgatgtctaccctgcggctgctgatgaagttgggaaaatacatctaattgcagat
gagagggttcaaggagcagtatttgatctgcctgaggagattgcaagagagttgctggat
aaggaaacaccaccgggaaacaccatcaaaaagatcactaagttgcctcctctgcaagat
gacggcccctcaagtgatttttatggcaaattttctagcagggatcgcttttctagcagg
gatcgttttccacgaggcggttctaaggaacggagaggaggttcaaggacccccaggggt
tggggtaatggccgagattctgacaatgagttccaaggtggaagaagtagctggtcccgg
gcttcgaaaagcagtagggatgactggctaattggtagtggcagcagatcaactaggtca
cccgcccgtgacagaaacttcggaggttcatgtttcaactgtgggagatctgggcataga
gcatcggactgccctgaaaaggtagacttttag
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