Gossypium arboreum (tree cotton): 108479421
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Entry
108479421 CDS
T05776
Name
(RefSeq) SEC1 family transport protein SLY1-like
KO
K19998
sec1 family domain-containing protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479421
Membrane trafficking [BR:
gab04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
108479421
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108479421
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
AhpC-TSA_2
Motif
Other DBs
NCBI-GeneID:
108479421
NCBI-ProteinID:
XP_017637492
UniProt:
A0A0B0NR49
LinkDB
All DBs
Position
12:7405327..7408157
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AA seq
623 aa
AA seq
DB search
MALNLRQKQTECIIRMLNLNQPVNPSGTANEEVYKILIYDKFCQNILSPLIHVKDLRKHG
VTLYFLIDKDRKPVHDVPAVYFVQPNNPNIQRIVADASRSLYDSFHLNFSSSIPRPLLED
LASGTLNSDAIHRISKVHDQYLEFVTLEDNLFSLSQKSTYVQLNDPSAGDKEIEDIIERV
VNGLFCVLATLAVVPIIRCPRGGPAEMVASALDQKLRDHLLSKNNLFSEGGGFVSSFQRP
ILCIFDRNFELSAGIQHDFRYRPLVHDILGLKLNRLSVPGEKGGMKSFELDSSDTFWMAN
GSLEFPEVAVEIETQLNKYKKDVDEVNKRTGGTAGAEFDGTDLIGNTKHLMNAVNSLPEL
TERKQVIDKHTNIATVLLGEIKERSLDAYVKKENDMMVRGGIDRNELMSVLKGKGTKIDK
LRFAIMYIISSETINPSEAEAVEAALRESEVDTSAFQYVKKIKSLNVSLASANSASRSNI
VDWAEKLYGQSISAVTAGMKNLLSGDKQLALTRTVEALMEGKPNPEIDSYLVFDPRAPKS
SSGTSSSHLKGPFKEAIVFMIGGGNYVEYGSLQDLAQHQQPAKQVIYGTTEILTGMEFVE
QLSLLGQKMGLGSSAAAAASATH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatcttcgccagaaacaaacagaatgtataattcgaatgttgaatctgaac
cagcctgtgaatccctctggaactgctaatgaagaggtttacaagatcttgatttatgac
aaattttgtcaaaatatactgtcccccttgatccatgttaaggatctacgaaaacatggt
gttaccttgtactttcttattgacaaggaccgaaagcctgtccacgatgtgcctgctgtg
tattttgttcagcctaataatcccaatatccaaagaatagtagctgatgcatcccgttct
ctatacgatagtttccatctgaatttttcttcgtctataccaaggccgcttttggaggat
cttgcttctgggactttgaattccgatgcaatccataggatctcaaaggttcatgatcag
tatttggagtttgtgacattggaggataatttgttctctttatcccagaagtctacttat
gtgcaattgaatgatccatccgctggggacaaagagattgaggatattatagagagggtt
gttaatggattattttgtgttttagctacacttgcagtcgtgcccataataagatgcccg
cgtggtggaccagctgagatggttgcttcagcattggatcagaagttgagggatcattta
ttgtcaaagaacaatttgttttctgaaggcgggggttttgtaagctcatttcagcgtcca
attttgtgcatctttgataggaatttcgagttatcagccggaatacaacatgattttagg
taccgtccactcgtacatgatattcttggattgaagcttaataggttgagtgtgccaggg
gagaaaggtggaatgaaatcgtttgaattggatagctccgacacattttggatggcaaat
ggatcgttggaattccctgaagttgctgttgagattgagacccagttgaacaaatataag
aaggatgttgatgaggtgaataaaaggactggtggtactgcaggagctgagtttgatggg
acagacttgattgggaacacaaagcacttaatgaatgcagtgaactccctgcctgagctg
acagagcggaagcaggtcattgataaacacacaaacattgcaacagtgcttttgggtgaa
ataaaggagaggtctcttgacgcctacgtaaagaaggagaatgacatgatggtgaggggt
ggcattgatcgaaatgagttgatgagtgtacttaagggaaaaggtaccaagattgataag
ctgcgttttgccataatgtatattatctcttcagaaaccattaatccatcagaagcagaa
gcagtcgaagcagcactgagagaatctgaggttgatacaagtgcatttcagtatgtgaag
aagatcaagtcattgaatgtttcattggcatcagcaaattccgctagtagaagtaacatt
gttgattgggctgagaagctctatggtcagtcaatcagtgctgtcactgcaggtatgaag
aacctattgtctggtgataagcagctagcattgacaaggactgtggaagctttgatggag
gggaagccaaaccctgaaattgattcttaccttgtgtttgatcctcgtgccccaaagtcg
agctctggcacaagtagcagtcatctgaaaggaccctttaaagaagctattgttttcatg
atcggaggtggaaattacgttgagtacgggagcttgcaagaccttgcccaacatcagcag
ccagccaaacaagtcatatatggaacaacagaaattttaactggaatggaatttgttgag
caactctcactgttggggcagaagatgggattgggcagttctgctgctgctgctgcttca
gcaacccattaa
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