Gossypium arboreum (tree cotton): 108479430
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Entry
108479430 CDS
T05776
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479430
Membrane trafficking [BR:
gab04131
]
Protein recycling
Others
EARP complex
108479430
Endosome - Golgi transport
Tethering complex
GARP complex
108479430
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
COG2_N
Motif
Other DBs
NCBI-GeneID:
108479430
NCBI-ProteinID:
XP_017637500
LinkDB
All DBs
Position
12:94494801..94506430
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AA seq
779 aa
AA seq
DB search
MGTEDVPLDDKAKRMRDLLSSFYSPDPSSTNDASSNHGSLDAIDTTSFDADQYMNLLIRK
SNLEALLQRHVEMAAEIKNIDTDLQMLVYENYNKFISATDAIKRMKSNIVGMETNMEHLL
DKIMSVQSKSDGVNTSLFEKREHIEKLHRTRNLLRKVQFIYDLPVRLEKCIKSEAYADAV
KFYTGAMPIFKAYGDSSFQDCKQASEEAIAIIVKNLQGKLFSDSESIQARAEAAVLLKQL
DFPVDSLQAKLLEKLEQSLGDLQLKPDEIENVSVESNDPKQGEVSDSIPIAAHEGSVLEF
AEAIRAYRVIFPDSEGQPTKLAQDLVVKHFETTQHYVKGRISSGKLLGVLRIIWTDVLLM
DEVLSEAVLPGFSLEAAQVALKQYVASTFNYLLRDISDALLRVNVSSKEAAEELPLQVAL
EASKKAVLQGSMDVLLEFRRLLDDDLGLLVQLRDFLIDWVQEGFQDFFRALDDRFLLLSG
RKSSSSQDQDLTGAHGEKVLAGLVLVLAQLSVFIEQTAVPRITEEIAASFSGGGGRGYEN
GPAFVPGEICRIFRSAGEKLLLHYTKMRTQKVSTLLRKRFTTPNWVKHKEPREVHMFVDL
FLQELKEIGSEVRQILPQGHSRKHRRSDSNGSTASSRSNQLRDDKMTRSNTQRARSQLLE
THLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFL
RTPLKETVEDEAAIDFLLDEVIVAASERCLDPIPLEPPILDKLIQAKLAKWKEQNPVTP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggacggaagatgttcctttggacgacaaggcgaagagaatgagagatctgctgtcg
agcttctactctccagatccttcttcgacaaacgacgcttcttcaaaccacggcagctta
gacgctatcgacaccacttctttcgatgccgatcagtacatgaacctcctgatacggaag
tcgaatttggaagcgcttcttcagaggcatgttgaaatggcggccgaaattaagaatatc
gataccgatttgcaaatgctggtttacgagaattacaacaagtttatcagtgccacggat
gcaattaaacggatgaaaagtaatattgtaggcatggaaacaaatatggaacatctgctt
gataagataatgtcagtgcaatctaaaagtgatggggtcaacacttctctttttgaaaag
agagaacatatagagaaattgcaccggacacgtaatcttctgcgtaaagttcagttcatt
tatgatctgcccgttagacttgaaaagtgcatcaagtcagaagcatatgctgatgctgtc
aagttctacactggagcaatgccaatttttaaggcatatggagattcgtcatttcaggac
tgtaaacaagcatctgaagaagcgattgctataatagttaaaaacttgcagggaaagctg
ttttcagactctgaatccattcaagctagagctgaagctgcagtgcttttgaagcagttg
gattttccggtggatagcttacaggcaaaactgcttgaaaagttagagcaatctcttgga
gaccttcagcttaaaccagatgaaattgagaatgtttctgtggagtctaatgatcctaaa
cagggagaagtttcagactcaattcctattgcagctcatgagggttctgtccttgagttt
gcggaggctatccgtgcttatcgagtaatatttcctgactcagaggggcaaccaactaaa
cttgctcaagacttggttgtcaagcactttgaaactactcagcactatgtcaagggacgg
atttcttctggcaaactcctgggtgttcttcggattatttggacagatgtgcttctaatg
gatgaagtgttaagtgaggctgttctacctggtttttctctggaggctgcccaagttgct
cttaaacagtatgttgccagcacgtttaattaccttctacgggacatatcagatgccctt
ctgagagtaaatgttagttcaaaagaggcagcagaggagctccccttgcaggttgctttg
gaagccagcaaaaaagctgtgctccagggcagcatggatgtcttactggaattccgtaga
cttcttgatgatgacttagggctgctagttcaattgagagatttcttaattgattgggtt
caagaaggatttcaggacttcttcagggctcttgatgatcgttttctcttactttcggga
agaaagagttcatccagtcaagatcaagatttaactggagcacacggcgaaaaagttctt
gctggtcttgtcctggtgttggctcaactttccgttttcattgaacaaactgctgtccca
agaattaccgaggaaatagctgcatccttttctggtggtggtggtcgaggctatgaaaat
ggacctgcttttgttcctggggagatatgtcgaatatttcggtcagctggtgaaaagctt
ttgctccattatacaaaaatgagaactcagaaggtatctactctgctaagaaagcggttt
acaacaccaaactgggtcaagcacaaggaacctagagaagttcatatgttcgttgatttg
tttcttcaagagttgaaggaaataggaagtgaggtgaggcagattttacctcaagggcac
tcgcgtaagcaccggcgctctgacagcaacggaagcactgcttcatcccggagtaaccaa
ttacgagatgataaaatgactaggtcaaatacacagagagccaggagccagcttttagaa
acacatctagcaaaattgttcaaacaaaaggttgaaatttttacaaaagttgaatatacg
caggagtccgttgtaacaactatagtaaaactttgccttaaaagcttgcaagaatttgcc
agactccagacttttaatcgaagtggtttccagcaaattcaactggatattcaattctta
aggactcctttgaaggaaactgttgaagacgaagcggcgattgatttcttacttgacgag
gtgattgttgcagcatcagagcgttgtcttgacccgattcctctcgagcctccaattttg
gacaaacttatacaagctaagttagcaaaatggaaggaacagaatccagttacaccctag
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