Gossypium arboreum (tree cotton): 108479436
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Entry
108479436 CDS
T05776
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108479436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479436
Membrane trafficking [BR:
gab04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
108479436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
EAL
Motif
Other DBs
NCBI-GeneID:
108479436
NCBI-ProteinID:
XP_017637508
UniProt:
A0ABR0MM39
LinkDB
All DBs
Position
12:complement(1649371..1658851)
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AA seq
1728 aa
AA seq
DB search
MSAPQMLGGPSRCGRVLGPSLDKIVKNAAWRKHSHIVSSCKSALDKLDTLSNSALSDPSS
PLLGLSSSDADFVLNPILLALDSNYAKLADPALESLFKLFSLGLVRGEIESNIPNSILYK
IVQSVCKVGGIGDESIELAVLRVLLSAVRCPCVLIRGDCLLHVIRTCYNVYLSALNGTNQ
VCAKSVLAQIVLIVFTRAEEDSMDVSTKTVPVSELLEFTDKNLNEGSSIYYCQNFVSEVV
NASEGVPDLKFSQPITGPELQNGESKVSNGEEKDGVEEEETKEGVESSSDGVTSKIREDG
FLVFKYLCKLSMKFSSQEDPDDEILLRGKTVSLELLKVIMNNGGSVWHTNERFLNAIKQY
LCLSLLKNSALSVMSIFQLLCSIFMSLITKYRSGLKAEIGIFFPMLILRVLENILQPSFV
QKMTVLNLLEKIVGDPQIIIDIFVNYDCDVDSPNIFERIVNGLLKTALGPPSGSTTTLSA
VQDVTFRHESVKCLVGIIKSMGAWMDGQLEIGHSDSPKSFENDTSAESHSTSTAEDGTLA
DCELHPEMNSELSDAATVEQRRAYKIELLKGVSLFNRKPSKGIEFLINTRKVGNTPEEVA
SFLKKNTTGLNETMIGDYLGEREEFALKVMHAYVDSFNFKSMDFGEAIRFFLRGFRLPGE
AQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTKSDFIRN
NRGINDGKDLPEEYLGALYDQIVKNEIKMNADSSVPQSKQENSINKLLGLDGILNLVSWK
QTEDKPLGANGLLIRHIQEQFKAKSGKSESVYHVVSDVSILRFMVEVCWGPMLAAFSVTL
DQSDDRLATTHCLLGFRHAVHVTAVLGMQTQRDAFVTSVAKFTFLHCAADMKQKNVDAVK
AIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLSVSNTETDEKMAKSAG
LQSLKNKGTLQNLAVMAVVRGGSYDSASVGVNNSGLVSPEQINHFIANLNLLEQIGSFEL
NHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWS
RMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMW
KSNSTEIRELIVRCISQMVLSRVRNVKSGWKSVFSVFTAAAADEHKNVVLLAFETMEKIV
REYFPYITETEAATFTDCVRCLIKFTNSRFNSDVSLNAIAFLRFCAFKLSEGGLVCTDKS
SVDGSSVSTVIKDNSGVQSFTDIDDPGSYWGPLLTGLSKLTSDSRLAIRKSSLEVLFNIL
NDHGHLFSQTFWLGVFSSVVLPIFDGVCEKRDKALQTEQDSPTTESPHCDAITWDTETSA
VALQCLVDLFISFYDVLRPRLSDVVCILTRYLRSSIQGPASTGVAALSHLTGELGNRLSE
DEWQEILLALKEAAMSTLPGFKKLLTSMDDIKVPHNSQSYSNTETSSDHGLTNDDLEDDN
LQNVAYVVSRMKSHISVQLLILEVVTDMYRTHLQFLSAANINIIVEIFSSISSHALQLNS
ETTMQKKIQVACSILELSEPPMLHFEKEAYQNYLDFLQYLVKKNLSISKEMNLELLLVAV
CEKIMKIYLNCTTVNHNVQQKSGDKVVVVTHWTLPLSSAKKEELAARTPLLVSALRALSG
LERDSFRKYISNVFLLLVDLVRSEHSSGEVQRVLSNIFQSCIGTIIMQ
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccccagatgctcggcggtccttcccggtgcggccgcgtgctcggcccatcc
ctcgacaagatcgtcaaaaacgccgcttggcggaaacactctcacatcgtttcctcctgc
aaatccgccctcgacaagctcgacaccctttccaactccgccttatccgatccctcttct
cctctactcggcctttcctcttccgacgccgactttgtcctcaatcccatcctccttgct
ctcgactccaattacgccaaactcgctgatcccgccctcgaatccctgttcaagttattc
tcccttggcctcgttcgcggtgagattgagagcaacatccccaattccatcctctataaa
attgtccaaagtgtgtgcaaagttggtggcattggcgacgaatcgatagagcttgctgtg
ctacgtgttttactctccgccgttcgatgcccctgcgttttgatccgtggtgattgcttg
cttcacgtcattagaacttgttacaatgtatatttaagtgctttaaatggaaccaatcag
gtctgtgctaagtccgttctagctcagattgtgcttattgtatttacccgagcagaagaa
gattccatggacgtttctaccaaaacagtgccggtgagtgagcttttagagtttactgat
aagaatttaaatgaagggagttcaatttattattgtcagaattttgttagcgaggttgtg
aatgctagtgaaggggttccagatttgaagttttcgcagccaattactggtccggagttg
caaaatggtgagtctaaggtgtcgaatggggaagagaaggatggagttgaggaggaagag
acgaaggaaggggtcgaatcgagttctgatggtgttactagtaaaattagggaggacgga
tttcttgtttttaaatatttgtgcaagttatctatgaaattttcgtcacaggaggatcct
gacgatgagatccttttgagagggaaaacagtgtctttggaactcctcaaggtgattatg
aataatgggggttcagtttggcacacaaatgagaggtttcttaatgcaattaagcagtat
ctctgcttatcattgttaaaaaacagtgctttgtcagtgatgtcaattttccagctcctg
tgttctatttttatgagtttgatcacaaaatatagatcagggttgaaagctgaaattgga
attttcttccccatgctaatcctccgagttctagagaatattctccagcctagttttgta
cagaaaatgaccgtccttaacttgctggaaaagattgttggggatccacagattatcatt
gatatatttgtgaactatgactgcgatgtcgattcaccaaacatatttgaaaggattgtc
aatggccttctgaaaactgctttagggcctccatctggttcaaccacaactttgtctgca
gttcaggatgttacttttcggcatgaatcagtgaagtgtttagttggcatcattaagtca
atgggagcttggatggatggacagctggagataggtcattctgactcacctaagagcttt
gagaatgacacttcagctgagagccattcaacttcaactgctgaagatggaactcttgct
gattgtgagttgcatccagaaatgaattctgaattatcagatgctgctacagttgagcaa
cgccgagcttacaagattgaactcctgaaaggcgtctcattgttcaacaggaagccatcc
aaaggcatcgagtttcttataaacaccaggaaggttggcaacactccagaggaagtggca
tcttttctaaagaaaaacactactgggctgaatgaaaccatgatcggcgattatttgggt
gaaagggaagaatttgctttgaaagtcatgcatgcttatgtagattctttcaatttcaaa
tctatggattttggtgaagcaattaggttcttcctacgtggctttaggttgccaggcgag
gcacagaaaattgaccgcatcatggaaaagtttgctgagcgctattgtaaatgcaatccg
aactcatttactagtgcagatactgcctatgtactggcatactctgtcataatgctcaac
actgatgctcataataacatggtcaaagataagatgactaagtctgatttcatccgaaac
aaccgaggaataaatgacggcaaggatttacctgaggagtatcttggtgctctttatgat
cagattgtgaaaaatgaaattaagatgaatgctgattcttctgttcctcaaagcaagcaa
gaaaacagcataaataagttattgggtttggacggtatactgaatctggttagttggaag
caaactgaagataagccattgggtgcaaatggtcttcttataagacatattcaagagcag
tttaaggcaaagtctggaaaatcagagtctgtttatcatgttgtttcagatgtatcaatc
ttgaggtttatggtggaggtctgctggggacccatgctggctgcatttagtgtcactctt
gaccaaagtgatgatagacttgctaccactcattgcttactgggctttcgacatgctgtg
catgtaactgcagtattgggcatgcagacgcagagagatgcttttgtcacatctgtggca
aagttcacttttctccattgcgctgcagatatgaaacaaaagaatgttgatgctgtaaag
gcaataatatctattgccattgaagatggtaaccatcttcaggaggcctgggagcatata
ttgacatgcctgtccagaattgagcatttgcaactgttgggagaaggtgccccaactgat
gcatcttttttatctgtgtcaaacactgaaacagatgaaaagatggcaaaatctgctggt
cttcaatctctgaagaacaaaggaaccctccagaatctagctgtaatggcagttgtccga
ggaggttcttatgatagcgcctctgttggagtcaataattctgggttggtatctcctgag
cagattaatcacttcattgcaaacttgaatttattggagcagattggaagttttgagttg
aatcatgtgttcgcacatagtcaaaggttaaacagtgaagcaatagtggcatttgtgaaa
gccctttgcaaggtgtctatatcggagttgcagtctccaacagatccccgtgtttttagc
ctgacaaaactagttgaaattgcgcattacaatatgaaccgcatcagattagtttggagt
cgcatgtggaatgttctctctgatttctttgtttcggttggattgtctgagaatttatct
gtagcaatttttgtaatggattcattgcggcaacttgctatgaaattcttagaacgtgag
gagctcgcaaattacaatttccagaatgaatttttgagaccatttgtgattattatgtgg
aaaagcaactctacagaaataagggaattaatagttcggtgtatttctcagatggtcctc
agccgcgtcagaaacgtgaaatcaggatggaaaagtgttttttcggtgttcacagctgct
gctgctgatgagcataagaatgttgtcttgctggcttttgagacaatggaaaaaatagtg
cgagaatactttccttatataactgagacagaggctgctacatttactgattgtgttaga
tgcctcatcaagttcacaaatagcaggtttaacagtgatgttagccttaatgctattgca
tttctgcggttctgtgcctttaaactttccgagggaggacttgtttgcactgataagagc
tctgttgatggttcatctgtttcaactgtaattaaggataattcaggtgtacaaagtttc
acggatattgatgatcctggttcttattggggccctctgctaacaggtttatcaaaacta
acatctgactcaagattagctattcggaagagttcgttggaagtgcttttcaacatcctg
aatgatcatggtcatcttttctcacagacattctggcttggtgtttttagttctgttgtt
ctccctatatttgatggtgtttgtgaaaagagagacaaggctctacaaactgagcaggat
tcaccaactacagaatctcctcattgcgatgcaattacatgggacactgaaacttctgct
gtggcattacagtgtttagtagatttatttattagtttctatgatgtattgaggccccgg
ctatcagatgtggtatgcatactgacaagatacttaagaagttcaatacagggtcctgca
agcactggggttgcagcattgtctcatttgacaggagagttaggaaacagactttcagaa
gatgaatggcaagaaatattactagcattaaaagaagcagccatgtctactttgccaggg
tttaagaagcttttgacatccatggatgacatcaaggtgccacacaattctcaatcctat
tctaatactgaaactagttctgatcatggattgaccaatgatgatcttgaggatgataat
ctacaaaatgtggcttatgtggtttcgaggatgaagagtcatatttccgtccagctactc
attttagaggtcgtgactgatatgtacagaacacacctacaattcttgtcagctgccaac
ataaatatcattgttgagatattttcttccatttcatcacatgctctgcaactgaactct
gagacaacaatgcaaaagaaaatacaggtagcatgctcaatcttggagctctcagaacct
cccatgcttcactttgagaaggaggcttatcaaaattacctcgacttcctccaatattta
gtcaaaaagaatctgtccatttccaaggagatgaacctagaattactgcttgtagcagtg
tgtgaaaaaataatgaaaatatacctcaactgtactactgtgaaccataatgtgcaacag
aaatcgggggacaaggtggtagtggtgactcattggactcttccattaagttcagccaag
aaggaagaattggcagctagaactccattacttgtgtcagcattgagggcattgagtggg
ttagaaagggattccttcagaaaatacatatcgaatgtctttcttctgttggtagatctt
gtccggagtgagcatagctcgggcgaagttcaacgggttctgagcaacatattccagtca
tgtataggtacaataataatgcaatga
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integrated database retrieval system
