KEGG   Gossypium arboreum (tree cotton): 108479467
Entry
108479467         CDS       T05776                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Module
gab_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108479467
Enzymes [BR:gab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108479467
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 108479467
NCBI-ProteinID: XP_017637579
LinkDB
Position
7:91998551..92013158
AA seq 251 aa
MVGLTVAVILDNMIEVEKSKKYRGGGGAGVIDVVAKFGAKADEKTPLLDAWNEACSSTSP
AKIVIPRGIYFLSTTTLDGPCKAPIELQVEGTVKAPADPGAFKEPKWTAFNRIENFKFSS
GGVFDGQGAIAYKREGCEKHDYRDSLLIDGKIFFEHFTVSALGESPNTDGIHIRRSDGVN
VLNTEIKIDDDCVSIGDGSKNLVINGVTCGPGHGIGIGSLELFKNKEPVDGVTVKNYCNT
PHPFQCRNRVT
NT seq 756 nt   +upstreamnt  +downstreamnt
atggtgggattgacggtggcggtcatcttagacaacatgatagaagtggagaaatcgaag
aaatatagaggaggaggaggtgctggtgttattgatgttgttgcaaagtttggtgcaaag
gcagacgagaaaactccattgttggatgcttggaatgaagcatgttcctcgacatctccg
gcaaaaattgtgattcctagagggatatattttttaagtacaactaccttagatggtcct
tgcaaggctcctattgagcttcaagttgaaggcactgtgaaggctccggcagaccctggt
gctttcaaggagcctaaatggactgccttcaatagaattgaaaattttaaattttctagc
ggaggagttttcgacggccagggagccattgcatataaaagggaaggttgcgaaaagcat
gattatcgtgattcacttcttattgatggaaaaatatttttcgaacatttcactgtatct
gcacttggagaaagcccaaacacagatgggattcacatcaggagatcagatggggtcaat
gttcttaacacggagataaaaatcgatgatgattgtgtttcaattggggatgggtccaaa
aatttggttatcaatggagtaacttgtggaccaggacatggtatcggtattggcagtctc
gaattgtttaaaaataaagaacctgttgatggagttacagtaaaaaactactgtaacacc
cctcacccgtttcaatgccggaatagggttacatag

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