Gossypium arboreum (tree cotton): 108479514
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Entry
108479514 CDS
T05776
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108479514
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108479514
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108479514
NCBI-ProteinID:
XP_052879209
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All DBs
Position
12:complement(102810181..102815708)
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AA seq
594 aa
AA seq
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MATASSSSGPFFGIREENQSQTKQQLQQHHTPTSSTGPVDPSPPPKKKRNQPGTPNPDAE
VVALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKTTKEVKKKVYLCPE
PTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRC
DCGTLFSRRDSFITHRAFCDALAQETARHPPPLNSIGTHLYGTSNYMGLGLSQVGTQISS
IQDPNNNQTAADILKLGGGGGGGPSRSSQFDHLLPPSMGSSSSSSFRPQQQAMGFVMEES
NQIFNQEHQSQHGLLGNSKPFQGLMQFPPDNNNNNNNNAASNASSAANLFNLSFLSKSGN
NGGAGDYNLTSSGLLMSDNFNNENGGNGGTNNASNLFSNNLMSDQMTSNIPSLFSSSVQN
NNMVPQMSATALLQKAAQMGSTSRNKNTNDDSLLRTFANSSSTGTKTSNFGAIFGDTAGS
NLHELMNSIASGNSPIFGSGYDAVHGQESPYTNRSSMGQEQPPPPPPQSMNVSGGGSDRL
TRDFLGVGHIVRNMSGGAAQQRQGIGISRLSSERNSNITAPTSQQSFGERGNFQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatcttcttcatcagggcctttctttggaattagagaagagaatcaaagc
cagacgaaacaacaactacaacaacatcatacgccaacttcatcaactggcccagttgat
ccatcgccgcctcccaagaaaaagagaaaccaacctggaactccaaatccagatgcagaa
gtggtagcactatctcccaagacattaatggctacaaacaggttcatatgcgaggtatgc
aacaaagggttccaaagggagcaaaatttacagcttcatagaaggggacacaacttgcca
tggaagctaaagcagaagacaacaaaagaagtgaagaagaaggtgtatctatgcccggag
cccacatgcgtccaccatgacccgtcgagggcacttggggaccttacgggcatcaaaaag
cattactcgagaaaacatggtgagaagaaatggaagtgcgagaagtgttccaagaggtac
gccgtgcaatctgattggaaagctcattctaagacctgtggcaccagagagtacagatgt
gactgtggcaccctcttctcaagacgtgacagctttatcactcacagagcattttgtgat
gcactggctcaagaaactgcaaggcaccctcctcctttaaactccattggcacccatttg
tacggaactagcaattatatgggcttagggttatctcaagttggaacccaaatttcatcc
attcaagacccgaataataatcaaactgcagctgacatcctcaaacttggtggtggtggt
ggtggtgggccttcaaggagttcccaatttgatcatcttcttcctccatcaatgggttct
tcttcatcatcatcgtttcgacctcaacaacaggccatgggtttcgtcatggaagaatct
aatcagattttcaaccaagaacatcaatcccagcatgggttgttgggaaacagcaaaccg
ttccaaggattaatgcagtttcctcccgacaacaacaacaacaacaacaacaacgccgca
agcaacgcttcttcggctgccaatctcttcaaccttagcttcctttccaagagtggcaac
aatggcggtgctggcgattataatttaacatcttcgggtttgctcatgtctgataatttc
aacaatgaaaacggcggcaatggtggaaccaacaacgcctccaacctcttctccaacaac
ttaatgagtgatcaaatgacttccaacatcccttctctctttagctcatcggttcaaaac
aataacatggtgccccaaatgtcagccaccgcattgcttcaaaaggctgctcaaatgggc
tctacttcaagaaacaaaaacaccaacgacgattcccttctaagaacctttgcaaactct
tcttcaaccggaaccaaaacctccaacttcggcgccattttcggagatacggctggcagc
aatctacatgaactaatgaactccattgccagtggaaattcccccattttcggaagcggc
tatgacgctgtacatggtcaagaaagcccttacacaaatagaagtagcatgggacaagaa
caaccaccgccgccaccgccgcaaagtatgaatgttagcggaggcgggtcggatagattg
actcgggacttccttggggttgggcatatagttagaaacatgagcggaggagcggcacaa
caacgacaaggaattgggataagcaggctgagttcagagagaaatagtaacataacggcg
ccgacaagccagcaatctttcggagaacgtgggaatttccagtga
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