Gossypium arboreum (tree cotton): 108479516
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Entry
108479516 CDS
T05776
Name
(RefSeq) cysteine protease ATG4 isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
gab04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108479516
04136 Autophagy - other
108479516
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108479516
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479516
03029 Mitochondrial biogenesis [BR:
gab03029
]
108479516
Peptidases and inhibitors [BR:
gab01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
108479516
Membrane trafficking [BR:
gab04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
108479516
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108479516
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
VitK2_biosynth
Motif
Other DBs
NCBI-GeneID:
108479516
NCBI-ProteinID:
XP_017637660
UniProt:
A0ABR0MK10
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All DBs
Position
12:260767..269933
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AA seq
488 aa
AA seq
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MKGFHERNDSLNCSSKASIDSSPTPGTGSEPGPNDSKFSKTSLWSNFFASAFSVFDTYSE
SSSSSACEKKSSFSKTNGWTAAVKRVVSGGSMRRIHERVLGPSKIGISSSTSDIWLLGLC
YKISQESSGDVDATSALAAFKQDFSSRILMTYRKGFDAIGETKITSDASWGCMLRSSQML
VAQALLFHRLGRSWRKPSQKPFDLAYIEILHQFGDSEASAFSIHNLVEAGKNYGLAAGSW
VGPYAMCRSWESLARSKREENDLECQLLPMAVYVVSGDEDGERGGAPVVCIEDASRHCFE
FSRHQADWTPILLLVPLVLGLDKVNPRYIPSLQATFTFPQCLGILGGKPGASTYIVGVQE
ENVFYLDPHDVQPVVNLSSDNLEADTSSYHCDIIRYIPLDSLDPSLAIGFFCRDKDDFDD
FCFRASKLADESNGAPLFTVAQTHSVFKPINHGDTMADAGGDRMDDSIGVLPTGDVDGNS
HEDDWQLL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttttcatgagaggaatgattctctgaattgctcttctaaagcttctattgat
agctcacctacccctggaactggatcagaaccaggtcccaacgactctaagttctcaaag
acttctctctggtcaaatttctttgcttctgctttctcagtatttgacacatacagtgag
tcgtcttcatcttcggcttgtgaaaagaagtcctcattttctaaaaccaatgggtggaca
gcagctgtgaagagggttgtctccggtggctcaatgaggagaattcacgagcgtgtttta
gggccgagcaagattggaatatctagctcaactagcgacatatggcttctaggtctctgc
tataaaatttcacaggagtcctctggagacgtggatgccaccagtgcattagctgcattc
aaacaagatttttcatcacgaatattgatgacatatcgtaaaggttttgatgctattggc
gagacaaaaatcacaagtgatgccagttggggttgcatgcttagaagtagccagatgctt
gttgcacaggcattgctttttcatagattggggagatcttggcgaaaaccttcacaaaag
ccatttgacctagcatatattgagattttgcatcagtttggtgattctgaggcctcagct
ttctccattcataatcttgttgaagctggaaagaattatggacttgctgctgggtcatgg
gtaggcccatatgccatgtgtcgctcgtgggaatctcttgctcgcagtaagagggaggaa
aatgaccttgaatgccagttacttcctatggctgtttatgttgtttctggtgatgaagat
ggtgagagaggaggagctccggtcgtctgcattgaagatgcttctagacattgttttgaa
ttttcacgacaccaagctgactggacacctattcttttgcttgtacccttggttcttgga
cttgacaaagtaaatcccaggtatattccatcgctgcaagcaacattcacctttccgcag
tgccttggcattttgggtgggaaacctggtgcctcaacttacattgttggcgttcaagaa
gaaaatgttttctaccttgatccacatgatgttcagccggtagttaatctgagttcggat
aatctggaggctgatacatcatcttatcactgcgatattatacgatacattcctctggat
tcacttgatccatccttggcaattggatttttctgccgagacaaagatgatttcgatgat
ttttgtttccgggcatccaaactagctgatgaatcgaatggtgctcccttgttcactgtt
gctcaaactcatagtgtttttaagcctattaaccacggtgatactatggctgatgccggt
ggtgatcgaatggatgattccattggtgtactgcctacaggtgatgtggatggcaacagt
catgaggatgactggcagctcctttga
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