Gossypium arboreum (tree cotton): 108479552
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Entry
108479552 CDS
T05776
Name
(RefSeq) cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00520
Amino sugar and nucleotide sugar metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108479552
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gab01003
]
108479552
Enzymes [BR:
gab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
108479552
Glycosyltransferases [BR:
gab01003
]
Polysaccharide
Structural polysaccharide
108479552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
zf-UDP
Xin
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
108479552
NCBI-ProteinID:
XP_017637718
UniProt:
A0A0B0MYB0
LinkDB
All DBs
Position
12:complement(94988772..94993108)
Genome browser
AA seq
1175 aa
AA seq
DB search
MVLKTASSPSSSPVTITVSSSGGKETGSRSMGLTSPVPRASKSNNPNSPSPLGSRGNRRA
SSGGRYCSMSQDDPIPIEEINSEFVTYTVHIPPTPDHQSISTSQTSLNEEGKDGLKLKPE
RSFISGTIFTGGYNCVTRGHVIDGSLERPETLKSGLVCGMKGCDEKEIEGKCECGFKICG
DCYLDCVASGGGHCPGCKEPYKDVSDDDEDDEVTSDSEEDDQALPLPSMRESKLDKRLSL
VKSFKGPNHPPDFDHTRWLFETKGTYGYGNALWPKDGYGSGASGFENPPDFGERSKRPLT
RKVGVSTAILSPYRLLIILRLVALGFFLTWRIRHPNRDAMWLWGMSITCELWFAFSWLLD
QLPKLCPVNRITDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTIL
SILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHNIEPRNPEAYFGQK
RDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKTQMKMG
GNLSDPIKVPKATWMSDGSHWPGTWASAEPDHSKGDHAGIIQAMLAPPNAEPVYGAEADG
ENLIDTREVDTRLPLLVYVSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHY
IYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPNDRYANHNTVFFDVSMRALDGLQG
PMYVGTGCIFRRTALYGFSPPRATEHHGWFGRRKIKLLLRKPKVTKKAEDEIVLPINGEH
NDDDDDDTDIESLLLPKRFGNSTSLVASIPVAEYQGRLLQDMQGMRNQGRPAGSLAVPRE
PLDAATVAEAISVISCFYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRD
AFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALFATRRMKFLQRVAYFNVGMYPFTSM
FLLVYCILPAVSLFSGQFIVQALSVTFLIFLLAITVTLCLLAILEIKWSGITLHDWWRNE
QFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPDDEEDEFAELYVVKWSFLMVP
PITIMMVNSIAIAVAVARTMYSPFPEWSKLLGGVFFSFWVLCHLYPFAKGLMGRRGKVPT
IVFVWSGLLSIIVSLLWVYINPPSGSKDYMKFKFP
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaaaacggcctcttctccgtcttcttctccggtgacgataacggtttcgtca
tcgggaggcaaagagactgggagtagaagcatggggttgacgagtccagttccacgagct
tcgaaatcaaacaacccaaattcacctagtccgctgggtagcagagggaatcgacgggct
tcaagtggaggaaggtattgctccatgtcgcaagacgatccaattccaattgaagagata
aactcagagttcgtaacgtatacggtgcatatcccaccaactcccgatcaccaatccatc
tcaacctcccaaacaagccttaacgaagaagggaaagatgggttgaagctgaaacccgag
aggagtttcatttcgggcactattttcacaggagggtacaattgcgttacccgtggtcat
gtcattgatggttccttggaaaggcccgagacattgaaatcaggcttggtttgtgggatg
aaagggtgtgatgagaaggaaattgaaggcaaatgtgagtgtgggtttaagatttgtggg
gattgttacttggattgcgtggcaagtggtgggggtcattgtcctggatgtaaagagcct
tacaaggatgttagcgatgatgatgaagatgacgaggtcacgtctgattctgaagaggat
gatcaggctttgcctttgccttcaatgcgtgagtccaagttggataaaagactttcactt
gtgaaatcattcaaagggccgaatcatccaccggatttcgatcataccaggtggttgttt
gagactaaaggcacttacgggtatgggaatgctttatggcctaaagatggttatggatca
ggtgctagtggctttgagaaccccccagattttggagagagaagtaagaggcctttgact
aggaaagttggagtttccactgcaattctcagtccatacaggctgcttattatactacgt
cttgttgccctgggtttctttctcacatggaggattaggcaccctaaccgtgatgcaatg
tggctatggggaatgtccataacgtgtgagctctggtttgccttttcctggctcctagat
cagctccctaagctctgccctgtaaacagaataaccgacctctctgttcttaaagagcgt
tttgagtctccgaaccttcgaaacccgaaaggacgatccgaccttccagggattgatgtc
ttcgtttccacggcagaccctgaaaaagaacctcctcttgtgactgcaaacaccatcctt
tcaatcctagctgttgactatccagtagaaaaagttgcttgttatctttcagatgatggt
ggagctcttctaacatttgaagctttagccgagacagccagctttgctagagtttgggtt
ccattttgccgtaaacataacatcgaaccccgaaatcccgaggcgtattttgggcagaag
cgtgattttcttaagaacaaagtgaggcttgattttgttagggagaggagaagggtgaaa
agagagtatgatgaatttaaggtgaggattaactcattgcctgaatccattaggaggaga
tcagatgcttacaatgcccatgaagagcttcgagcaaaaaagacacaaatgaaaatggga
ggcaatctttcagaccctattaaagtccctaaggctacttggatgtctgatggttctcac
tggcctggcacttgggcttctgcagagcctgaccattcaaaaggagaccatgctgggatc
atacaggcaatgcttgctccaccgaatgcagaaccagtttatggtgcagaagcagatggg
gagaacttgattgacacaagagaagtagatacaaggttgccattgttggtttatgtgtct
cgtgagaaacgtccaggttatgatcacaacaagaaggctggagcgatgaatgctttggtt
cgaaccagtgctatcatgtcaaatggtccattcatcctcaatcttgactgtgatcattac
atttacaattcattggctcttagggaaggaatgtgtttcatgcttgacagaggtggtgat
aggatttgttatgttcaattcccacaaaggtttgaagggattgatcccaatgaccgatat
gcaaatcataataccgtgttctttgatgtgagcatgagagctcttgatggtttacagggt
ccaatgtatgtaggtacaggttgcattttcaggagaactgcactctatgggtttagtcct
cctagagctactgaacatcatggatggtttggtagaaggaaaatcaagttacttttgagg
aaacccaaggtgacaaagaaagcagaagatgagatagtattgcctattaatggggaacac
aatgatgatgatgatgatgatacagatattgagtctttgcttcttcctaaaagatttggg
aactccacttctctggtagcatctatccctgtcgctgaataccaaggaaggttgctccaa
gatatgcaaggaatgcgaaaccaaggcaggccagcaggttctcttgcagtgccgcgtgag
ccattggatgctgcaacagttgcagaggccattagtgttatatcttgcttctatgaggat
aaaactgagtggggaaaacgagtaggatggatatatggctctgtcacagaagatgtggta
accggttatagaatgcacaaccgtggatggagatcagtgtactgtgtaaccaagagggac
gcattccgtgggactgcccctatcaatctaacagatcggttgcaccaagtacttcgttgg
gcaaccggttctgtcgagatattcttttcgagaaacaatgcactctttgctactcgacga
atgaagttcttgcaaagagtagcatatttcaatgtgggaatgtaccctttcacttctatg
tttctcctagtctactgcattctaccagctgtttctctattctcagggcagttcatagtg
caagctctcagtgtgaccttcttgatattcttgttggccatcacagtcaccttatgccta
cttgccatactcgaaatcaaatggtcaggtatcacacttcatgattggtggcgaaacgaa
cagttttggttgattggtggaaccagtgctcatcctgcagctgtgctacaaggacttcta
aaagtcatagcaggagtcgacatctcattcaccttaacttccaaatccgccacccccgat
gacgaagaagatgagtttgcagagctatatgtcgtaaaatggagctttctaatggtacct
ccaatcacaatcatgatggtaaactcaatcgcaatcgcagtggccgttgcaagaaccatg
tacagccctttcccagagtggagcaagcttctcggaggggtgttctttagcttttgggtc
ctttgccatctctatccatttgcaaaaggattgatgggaagaagaggaaaagttccaacc
attgtgtttgtatggtcaggcttgctctccatcattgtttcgttgctttgggtatacatc
aatcctccatctggaagtaaggattacatgaagttcaaattcccttga
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integrated database retrieval system
