Gossypium arboreum (tree cotton): 108479588
Help
Entry
108479588 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108479588
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108479588
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108479588
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108479588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108479588
NCBI-ProteinID:
XP_017637779
LinkDB
All DBs
Position
12:complement(93751290..93755319)
Genome browser
AA seq
856 aa
AA seq
DB search
MDDSCAVCADNLEWVAYGACGHRDVCSTCVSRLRFICNDRRCCICKTESNVIFVTKALGD
YTRMINDFSVLPSDVREGRVGSYWYHEDTQAFFDDVDHYRMIKAMCRLSCSICDKMDEQS
NDGVKRRGKFRNIEQLKGHLFHKHRLVMCSLCLEGRKVFICEQKLYTRAQLHQHINTGDS
EVDGTESERGGFMGHPMCEFCKTPFYGDNELYSHMSTEHYTCHICQRQHPGQYEYYKNYD
DLEIHFRRDHYLCEDEACLAKKFIVFQSEAELKRHNTIEHGGRMSRAQRSAALQIPTSFR
YRRSNEENRRGRGRTFRREASDNDYQLSMAIEASLGMASDPPASSTAQAVSNHRDTNDID
PLVQPFESLSTTDAESSSRYLQALGTGSRGGPLQESSFPPLPVAPSTSQQKSQHSSGLPN
NNMAAHLRRQKNGNKNALSSAQAWPATSRRTGQASSISSQVRPGANVSAVISLGNGSGNG
NRVAQLGYASSTQAHAHAQAQAQAQAQAQAQAQAQAQARPTTADILMSSGSRTSSGSKSR
ISHSSSAPNLSDGGYSEPSASDFPPVSAAQGHKQSSSSQVLTNVEDVRMANKSLVEKMRA
ALDYDEEKYTAFKEVSGQYRQGLIGTDRYLDYVHQHGLSHLVLELARLLPDVQKQKELID
TYHASLQSNGLQENGGGAEGSVLWKEKDASKKGKGKGKSVDTAGSNSKDVLADSILSTVR
QLQSSYKPTEEITEVLSKDGYRPSKGKAKVMVEEQQVQLNSSNQPSIRIGGQNESLPVKA
GSGDGGGGSKQRKKTSKFHRVRLGDGSMASLVDLKNSEPDPEPEPLDNKFDGSQNSTGAL
PVRGVWKKGGSKKLFL
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgtgcggtttgtgctgacaatttggaatgggttgcctatggcgcctgt
ggtcatcgggacgtctgctccacgtgcgtctctcgtctccgattcatctgcaacgatcgc
cgctgctgcatctgtaaaactgaatccaacgtcatcttcgtcactaaggctttaggggat
tatacgaggatgataaatgacttctctgtattgccatctgatgtaagagaaggacgggtg
ggttcttattggtaccatgaggatacacaggcctttttcgatgatgttgatcactacagg
atgatcaaggcaatgtgcaggctttcgtgcagtatatgtgacaagatggatgagcagtcc
aatgatggggtgaagcggcgagggaagtttaggaacattgaacagctgaaaggtcatttg
tttcataaacatagattggttatgtgcagcctgtgtttggagggtcgaaaggtgtttatt
tgtgaacaaaagctatatactagagcacagttacatcaacatataaacacaggtgactct
gaggtggacggaactgagagtgagagaggtggcttcatggggcatccaatgtgtgaattc
tgcaagaccccgttttatggggataatgaattatattcacacatgtccacagagcactat
acatgtcatatatgccaaaggcagcatccaggacaatatgaatattacaagaattatgat
gaccttgagattcattttcgccgagatcattacctatgtgaggatgaggcttgccttgcc
aaaaagttcatcgtcttccagtctgaagctgaactaaagagacataataccattgaacat
ggaggtcgcatgtctcgagcacaacgtagtgctgctttacaaattccaacaagctttcgg
tatcgtcgaagtaatgaagaaaatcgccgtggaaggggacgaacatttcggcgtgaggct
tctgataatgactatcaactttcaatggccattgaggcaagtttgggaatggccagtgat
cctccagcatcatctacagcacaggcagtctctaatcatagagacacaaatgatattgat
ccgcttgttcagccttttgagtcattatctacaacagatgctgaatcatcttcaagatat
cttcaagctttggggacaggttcaaggggtggacctttgcaagaatcttcttttcctcct
ctccctgtggctcccagcaccagtcaacagaagtcccaacatagctcaggtttaccgaat
aacaacatggcagcgcatctacggagacagaagaatgggaataaaaatgctttgagttca
gctcaagcttggccagcaacaagtcgtaggactgggcaagcatcaagtatttcaagtcag
gttagaccaggagcaaatgtttcagctgtaatatcgcttggtaatggtagtggtaatggt
aacagggttgcacagttgggctatgcaagctcgactcaggctcatgctcatgctcaggct
caggctcaagctcaggctcaagctcaagctcaagctcaggctcaggctcaggctcgaccc
acaacggcagatatattgatgtcatctggttctcgaacaagctctggcagcaaaagtagg
attagccattcttcatcagctccaaatctcagtgatggtggatactcagaaccatctgct
tctgattttcctcctgtttctgctgcacaagggcacaagcaatcctcaagcagccaggtg
ctgacaaatgtggaagatgttcgtatggccaacaaatctttggtggaaaagatgcgagct
gctcttgattatgatgaagaaaaatatactgcttttaaagaagtatctggacagtatcgt
cagggcttaataggcacagacagatatttggattatgtacatcagcatggcttgtcacat
ctagttcttgagctggctagactcttgcctgatgttcagaagcagaaagaactaattgac
acctaccatgctagtttacaaagcaatggtctgcaggagaatggtggtggggccgagggc
agtgtgttgtggaaggagaaggatgcctctaagaaggggaaaggaaaagggaaatcagtt
gatactgctggcagtaattcaaaggatgttctggccgatagtattctcagcactgtccgc
caattgcagtcaagttataagcctactgaagaaattacggaagtgctatcaaaggatggt
taccgtccttccaaaggtaaagcaaaggtgatggtggaggagcagcaggtgcaactcaat
tcaagcaatcagccatcaataagaattgggggccaaaatgagtccttaccagtgaaagct
ggatcaggggatgggggtggtggtagcaagcagcgaaaaaaaacctcaaagttccaccga
gttcggcttggtgatggttcaatggcatcactagtggatctcaaaaattctgagccagac
cctgaacctgaaccattagataacaagtttgatggtagccaaaactcaactggagcactg
cctgtacggggggtatggaagaagggaggaagtaaaaagctctttttataa
DBGET
integrated database retrieval system
