Gossypium arboreum (tree cotton): 108479639
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Entry
108479639 CDS
T05776
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
gab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108479639
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108479639
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108479639
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108479639
03036 Chromosome and associated proteins [BR:
gab03036
]
108479639
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108479639
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108479639
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108479639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
Htt_N-HEAT_1
Adaptin_N
CLASP_N
Cnd1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
108479639
NCBI-ProteinID:
XP_017637845
LinkDB
All DBs
Position
12:complement(118973375..118979794)
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AA seq
588 aa
AA seq
DB search
MAMIDEPLYPIAVLIDELKNEDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHANVLLPPLETLCIVEETCVRDKAVESLCRIGAQMREQ
DLVEFFIPLLKRLAAGEWFTARVSSCGLFHIAYPSAPEALKTELRTLYGQLCQDDMPMVR
RSAATNLGKFAATVEAPHLKVDIMSMFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNSELAIQNILPCVKELSTDSSQHVRSALASVIMGMAPILGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLTEEFGPDWAMQHIVPQV
LDMINNPHYLYRMTILHAVSLLAPVMGKDITCSKLLPVVINASKDRVPNIKFNVAKVLQS
LIPIVDQSVVEKTIRPCLVELSEDPDVDVRYFATQALQSSDQQMMMSS
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatcgacgagcctttgtatcccattgcggtgttgatcgatgagctaaagaac
gaagatatacagcttcgtttgaactcgatccgtaagctttctacgattgcacgtgccctt
ggtgaagaaaggactcgaaaagaattgattccttttcttagtgagaacaatgatgacgat
gatgaagttctccttgccatggctgaagaattgggagtttttattccttatgttggaggt
gtggaacatgctaatgttttgttgcctccgttggagactctttgcattgttgaggaaact
tgtgtgagggataaggctgttgagtcgttgtgtagaattggtgctcaaatgagagagcag
gacttggttgagttctttattccactgttgaagagattggctgctggtgagtggtttaca
gctcgagtttcctcttgtggattgtttcatattgcatacccaagtgccccagaggcactg
aaaactgaattaagaacattatacggtcaactttgccaagatgacatgcccatggttagg
agatctgctgcgacaaatcttggaaaatttgctgctactgtagaagcacctcatttgaag
gtggacattatgtctatgtttgatgatttgacgcaggatgatcaagattctgtccgattg
ttagctgttgagggctgtgcagctcttggaaagttgttggaaccccaagattgtgtcgct
cacattctccctgtcatagttaatttctcacaggacaagtcttggcgtgtccgttacatg
gtcgcaaatcagttgtatgagctgtgtgaagctgttggtcctgagcctactaggtcggac
ctagtacctgcatatgttcgcctacttcgtgataatgaagctgaagtccggatagctgct
gctgggaaagtaactaaattttgccgaattctgaattcagaattagcaattcagaacatt
cttccttgtgtcaaggaattatcaacagattcgtcccaacatgtccgttctgctttggct
tcagttataatgggaatggcacccattttggggaaggatgcgaccatagaacaattgctt
cctatatttctttctcttctaaaagatgaatttccagatgtccgactgaatatcattagc
aagcttgatcaagtcaaccaggtaattggaattgatttgctgtcccagtccctattgcct
gcaattgtggagctcgcagaggatagacactggagggttcggcttgcaataatagaatac
atacctttattggcaagccaattgggtgttggcttcttcgatgacaaacttggtgcactc
tgcatgcaatggttaaaagataaggtttattctatacgtgatgctgctgctaataacgtg
aagcgcctcacggaagaatttggacctgattgggcaatgcagcacatagttccacaggtt
ttggacatgataaacaacccgcattatctatatcggatgaccattctacatgcggtttct
ctacttgcccctgttatgggaaaggatattacttgttcaaaacttctgcccgtggttatt
aatgcttctaaagatagggttccgaacatcaaatttaatgtcgccaaggtgttgcagtca
cttatccctattgttgatcaatctgtggtggagaagacaattcggccatgcctagttgaa
ttaagtgaggatccagatgttgatgtcaggtatttcgccacccaagctctacaatcaagt
gatcaacaaatgatgatgtctagctag
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