Gossypium arboreum (tree cotton): 108479663
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Entry
108479663 CDS
T05776
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like
KO
K22804
structural maintenance of chromosomes protein 6
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108479663
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108479663
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SbcC_Walker_B
AAA_29
CCDC39
AAA_21
SMC_hinge
Nuf2_DHR10-like
ACBP4_C
ABC_tran
MC7
Motif
Other DBs
NCBI-GeneID:
108479663
NCBI-ProteinID:
XP_017637872
UniProt:
A0ABR0MU65
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All DBs
Position
12:112274654..112288762
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AA seq
1058 aa
AA seq
DB search
MSSSRVFSCQMYGAQRSGAGTIRRIRLENFMCHSSLEIELGEWVNFITGQNGSGKSAILT
ALCIAFGCRARETQRASKLKEFIKTGCSYATVQVDIKNEGVDSFKPEIFGDTIIIERRIS
DTTSSTVLKDRQGRKVASRKEDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNDRDKFK
FFFKATLLQQVDELLQSIIKQLKDACALVDELEKLIRPAQLELSELQEKIENIKRVEQIS
QEVQLLRKKLAWSLVYDEDKRLQEQAKNIETLKKRIPTCQAKIDSTLDKLEKLLERLSKK
KVQVASLVEKTSEVKRKKDELWDALCSARKEKLELEEEHRRGTKQIHKMRNDVRRLEEQA
RDIQDKHIRNTQAEESEIEEQIKELEYAVDNVQSLLSSLKDEENTLSEQISAEMDAMKKI
NDEINYYERKQREVHHQICELRLHQTNKVTAFGGDGVLRLLREIERHHKAFSMPPIGPIG
AHVTLVNGDTWAPAVERAIGKMLNAFIVTNSEDACALRKCAREARYNFFPIVIQRFSRPR
LIIPNHSLPQTSHPTTLSVLHSDNPTIYNVLVDVCKAERQVLVKDYNMGRAVAFDQRIPN
MLEVFTLDGFKMFSRGSVQTVLPINKNLKIGRLRGSFGDQVKEFESHVSNIQQDIDQRKS
RKRELEKKVQDFNRKLDNKKKRRLDVEREFMAKRMKLQDMQKSHAVDASLLPESTTNELL
QEISDGKMVIKKKEALLEALKDRINEAEEKARTLKLSFEDLGESTKGEVEAFQKAEEELT
EIEKEIHNAEANKLHYENIMNNKVLPQIKEAEAKYLELEKDRKESYKKASVICPESDIEA
LGDRDETTTEQLDAKLKRLNQRLMHESQQYSESIDDLRMLHQEKERRILRELHTYKAFRE
RLDACQKALDLRWKKFQRNASLLRRELTWQFNGHLGKKGISGHINVSYEEKTLSVEVKMP
QDASSTIIRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTL
VEFALAQGSQWIFITPHDISNVKNGERIKKQQMAAPRL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttctagggttttttcctgtcagatgtatggcgctcaacgatccggggcgggt
accattaggaggatccggttagagaacttcatgtgccacagtagtctcgaaatcgaactc
ggcgagtgggttaatttcatcaccggtcaaaacggaagcgggaagagcgcgatactgacc
gctttatgtatcgcgtttggctgccgcgctagagaaactcagagagcgtctaagttgaag
gaattcataaaaactggttgcagttatgctacggttcaagtggatatcaaaaacgaagga
gttgattcttttaagccagaaatttttggtgataccataattattgaacgcaggatttct
gacactacgagttccactgttttgaaagatcgacaaggtagaaaagttgctagccgcaaa
gaggaccttcgtgagctggttgaacatttcaatattgacgtcgagaatccgtgtgttatt
atgagtcaagacaaaagcagggagtttttgcactctgggaatgacagagataaattcaag
ttctttttcaaggctacgcttcttcaacaagttgatgagcttttacaaagtattattaaa
caattgaaggatgcatgtgctcttgtagatgagttggaaaaattgataagacctgcacag
cttgaattgagtgaactgcaagaaaagattgaaaacataaagcgtgtagaacagatttca
caggaggtgcagctgttaaggaaaaagcttgcttggtcattggtgtatgatgaagataag
cgtttacaagagcaagcaaagaacattgaaacgctgaaaaagcgcattcccacttgccag
gctaaaattgattcaacattagataaattggagaagttgttggaacgcctttcgaagaag
aaagttcaagttgcttctttggtggagaaaacatctgaagtgaaaagaaagaaagatgaa
ttgtgggacgctctttgctcggcaaggaaagaaaagcttgagcttgaagaagagcatcgc
cgcggcactaagcaaattcacaagatgaggaatgatgttaggaggcttgaagagcaagcc
cgtgatattcaggataaacatattagaaacacacaggctgaagaatcagaaatagaagag
cagattaaggaactggaatatgctgttgataatgtccagtcattgctctctagtttgaag
gatgaggagaatactttatcagaacagatttcagcagaaatggatgcaatgaagaagatt
aatgatgagataaattactacgaaagaaagcagcgtgaagttcatcatcaaatttgtgag
ctccgtctacatcaaaccaacaaggtcactgcctttggtggtgacggagtgctacgtctt
ctacgtgaaattgagaggcatcacaaggcatttagcatgccaccaattggtccaattggt
gctcatgtgacattggtcaatggtgatacatgggctcctgctgttgaacgagctattggg
aagatgctaaatgcattcattgttacaaattctgaggatgcttgtgctcttagaaaatgt
gcaagggaggcaagatataacttctttccaattgtcatacagaggttttcaagaccaagg
ttgataataccaaatcattcactcccccagacgagccacccaactactctatctgtttta
cattcagataatcctaccatctacaatgtcttggtagatgtgtgtaaagctgagaggcaa
gttcttgtcaaggattacaatatgggaagagctgttgcatttgatcaaagaataccgaat
atgttggaggtttttaccctagacgggtttaaaatgttttcacggggttcagtccagaca
gttcttcccataaacaaaaatcttaaaattggccgtcttcggggttcttttggcgatcaa
gttaaggagtttgaaagtcatgtgtcaaatattcaacaagatattgatcagcgcaaaagt
aggaagagggagctagagaaaaaggttcaggattttaacaggaagctggataataagaag
aaaaggcgcttggatgtggaacgggagttcatggctaagagaatgaaactgcaggatatg
cagaagtcacatgctgttgatgctagtctgttgcccgagtcaactactaatgaacttctt
caagaaatttcagatggtaaaatggtgatcaagaagaaggaagcattgctagaagcactt
aaagataggatcaatgaagcagaagaaaaggccagaactcttaagttatcatttgaggat
ttaggggagtcaacaaagggggaggttgaagcctttcagaaagcagaggaggagttaaca
gagatagagaaagaaatacacaatgcagaagcgaataagctccattatgaaaatattatg
aacaacaaggttcttcctcaaatcaaggaggcagaggcaaaatatctggaacttgaaaag
gatcgtaaggagagctataaaaaggcttctgttatttgccctgagagtgatattgaagct
ttaggagatagggatgaaaccacaactgagcaactggatgctaagctgaagagactgaat
cagagacttatgcatgagagccaacaatattcggaatcgattgatgatcttaggatgttg
catcaggagaaagagcgtagaattttgagggaactgcatacttataaagcttttcgagaa
agattagatgcttgtcaaaaagctctcgacttgcgttggaaaaaatttcaacgtaacgca
tcacttctgagacgcgagttgacttggcaattcaatggccatttgggaaagaaaggtatc
agtggacacattaatgttagttatgaagaaaagaccctttcagtagaggttaaaatgcct
caagatgcatcaagcaccatcattcgtgatacaagagggctctcaggaggagagcgatcc
ttctcaacattatgttttgcgttggctcttcatgatatgactgaagccccatttcgagct
atggatgagtttgatgtgttcatggatgctgttagccgaaaaatcagcctggacacgtta
gtcgagtttgcattggctcaaggatcccaatggatatttatcacacctcatgatatcagc
aatgtgaagaatggagagaggataaagaaacagcagatggcagctcctcgcttatga
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integrated database retrieval system
