KEGG   Gossypium arboreum (tree cotton): 108479701
Entry
108479701         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108479701
  KO
K25059  replication stress response regulator SDE2
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108479701
   03032 DNA replication proteins [BR:gab03032]
    108479701
   03400 DNA repair and recombination proteins [BR:gab03400]
    108479701
Spliceosome [BR:gab03041]
 Complex C
  Other components
   Complex C specific factors
    108479701
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108479701
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108479701
SSDB
Motif
Pfam: SDE2_2C SDE2 ubiquitin DUF5052
Other DBs
NCBI-GeneID: 108479701
NCBI-ProteinID: XP_017637927
UniProt: A0A0B0MLY5
LinkDB
Position
12:90962284..90964775
AA seq 449 aa
MEDHRISKDDISNNNNNVNPRQLQLFVKLVNGQTLSLQFSSPQVQVGSVKRQIQEITKIP
INFQRLIRGHQLKDDSVISHPDATLNLSFSLLGGKGGFGSLLRGAATKAGQKKTINFEAC
RDMSGRRLRHVNAEKRLEEWKAEEEERKLEKMAEDFIKKKAKNGKKGVGDGEAEKYVAKY
REQSARCVAVVEESVKAACLGKRKAVPGGADPKRLKIWMGKRKLNESDSDNGSDDEDSED
DEEDEKSVVLNNGNNSDSSKGTEGSSGSVYKRRSDVEFSGGVSSESGSEEEKDIFPLQNS
KSGGEDVLNVENDKVEVEAMQPEIPENNGTKTEDQKEIVSQGADVPVQENEGVGNKLIDR
VNGCSDVKSEFHGETVVSNTNVAIPEKPLNFDDFNSPQEMEVLGLERLKSELQARGLKCG
GTLQERAARLFLLKSIPLDKLPKKLLAKK
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggaagatcatcgaattagcaaagacgatattagcaacaacaacaacaacgttaatccg
aggcaattgcagctattcgttaaacttgtaaatggccaaacgttatcgcttcaattctcc
tccccacaagtccaagtcggttccgtcaagcgtcaaattcaggaaatcacgaaaatccca
atcaatttccagcgcctgattcgcggccatcagctcaaggacgattctgtaatttctcac
cccgatgctaccctcaacctctctttcagccttctcggtggcaaaggaggtttcggatcg
ctgctacgtggcgcagccacaaaggccgggcagaaaaagacgatcaatttcgaggcttgc
cgtgatatgagcggaagaaggctgaggcacgtgaatgcggagaagaggctggaggagtgg
aaggcggaggaggaagagaggaaattggagaagatggccgaggattttataaagaaaaag
gcgaaaaatgggaaaaaaggggttggagatggagaagccgagaagtatgtggcgaagtac
agggagcaatcagcaaggtgtgtggcggtggttgaagaatccgttaaggcggcgtgccta
ggaaagcggaaggcggttccaggcggagctgaccctaaaaggttaaagatttggatggga
aagaggaaattaaatgagagtgatagtgataatggcagtgatgatgaagatagtgaagat
gacgaggaagatgaaaaatctgtagttttgaacaatgggaataattcggattctagtaag
ggaaccgaggggagttccggttcggtttataagagaagatctgatgtggaattctcaggt
ggagtatcgagtgagagtggttccgaggaagagaaagacatttttccactgcaaaactcg
aaatccggtggggaagatgtgctcaatgtagaaaatgataaggttgaagttgaagcaatg
caacccgagataccggaaaataatggaactaaaaccgaagatcagaaggaaatagttagt
cagggtgccgatgttccagttcaagaaaatgaaggagtcgggaacaaattgatagataga
gtcaatggttgttctgatgtgaaatcagaatttcatggagaaacggtagtttcaaatact
aacgtggctatacctgaaaagccattgaactttgatgacttcaattcgccgcaagagatg
gaggttcttgggttggagaggttgaaatcagaactgcaggctcgtggtctaaaatgtggc
ggtactttgcaagaacgagctgctcggcttttcctgctaaagtctatccctttggataag
cttccaaagaagttgcttgcaaagaaatga

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