Gossypium arboreum (tree cotton): 108479709
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Entry
108479709 CDS
T05776
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108479709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108479709
03051 Proteasome [BR:
gab03051
]
108479709
Membrane trafficking [BR:
gab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
108479709
Proteasome [BR:
gab03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
108479709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Ubiquitin_2
UBA_NBR1_C
XPC-binding
Dsc3_N
Rad60-SLD_2
COG2p_C
RPW8
TSC22
Motif
Other DBs
NCBI-GeneID:
108479709
NCBI-ProteinID:
XP_017637940
UniProt:
A0A0B0NKQ1
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All DBs
Position
12:7413774..7419817
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AA seq
553 aa
AA seq
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MGGDGDSSESGLGDNGGGEEEGVMVNIRCSNGSKFTVRTKLESTIGSFKVVLAQSCDIPA
DQQRLIYKGRILKDDQTLQSYGLQADHTVHMVRSFAPSSSAPPPVATTNVGTPNTTPGVT
RGVGSNEGAGLGASIFPGLNPLGGNGGSFGLFGSGLPEFEQVQQQLTQNPNMMREIMNTP
AIQSLVNNPELMRTLIMSNPQMREIIDRNPELGHILNDPSILRQTLEAARNPELMREMMR
NTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNNGNTPGSNPFAALLGNQGGSQ
ARDSPSNISVTGSESIQGQTSPNTNPLPNPWNNTVRGVTQTNTTARSNPAGDARTPGIGG
LGGPGLPDMPPMLNGMPDASQLTQLLQNPAISQMMQSIMSNPQYMNQIMNLNPQLREMFD
LNPQLREMMQNPEVLRQLFSPDTMQQMLSLQQSLMSQLNRQQTSQDSTQTSGTTGAPPTA
SLDLLMNMFGGLGAGGLSVPNQPDVPPEELYATQLSQLQEMGFYDTQENIRALRATAGNV
HAAVERLLGNSGQ
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggatggcgattcgagtgagtcaggactcggtgacaatggaggaggagaagaa
gagggagtaatggttaatatccgatgctctaatggttcaaaatttacggttaggaccaaa
ctcgaatcaaccattggatctttcaaagttgttttagctcagagttgcgatatcccagct
gatcagcaacgattgatttataaaggccgaatcttaaaagacgaccaaacccttcaaagt
tacggtttgcaagctgatcatactgttcatatggtccgtagttttgccccatcttcatca
gcccctcctcctgttgctactacaaatgttggaactcctaatactacaccaggggtcact
cgtggtgttggttctaatgagggtgctggtctgggagcatcaattttccctggacttaat
ccgcttggtggtaacggaggtagttttggtttgtttggatcaggacttcctgaatttgaa
caagtacagcaacaactaactcaaaatcccaacatgatgagggaaataatgaatacacct
gctattcaaagtttggtgaataacccagagttaatgcgcactttgattatgagcaatccc
caaatgcgtgagattattgaccggaatccagagcttgggcatatacttaatgatcctagc
attctgcgacagactttggaagctgctaggaatcctgaactcatgcgtgaaatgatgcga
aacactgacagggctatgagtaatattgaatcctctcctgagggatttaacatgctcagg
cgtatgtatgaaaatgttcaggagccatttttgaatgctacaactatggctggaaataat
ggaaatactccaggttcaaacccattcgcagctcttttgggcaatcaaggcggttctcaa
gctagggattcacctagtaacatttctgtaactggttctgaaagcattcaaggacaaact
tccccaaacacaaatcctcttcctaacccttggaacaacactgttagaggtgtaacccag
accaatactactgcgaggtcaaatcctgctggggatgctaggacaccaggtattggtggt
ctgggaggtcccgggcttccagacatgccacccatgttgaatggaatgccagatgcttct
cagttgactcaattgttgcaaaatccagctatatcacagatgatgcagagcataatgtct
aatccccaatatatgaatcagattatgaacctcaacccccaacttcgtgaaatgtttgat
ttgaatcctcaattgagagaaatgatgcaaaacccagaagtacttcgtcagttgttttcc
cctgatacaatgcagcaaatgctatctttacagcagtctcttatgtctcagctcaatcga
cagcaaacatcccaagattcaacacagacaagtggtactacaggagcaccccctactgct
agtctggatttgttgatgaatatgtttggtggtctaggtgctggcggcctcagtgttccc
aaccaacctgatgttcccccagaagaactgtatgccacgcaattatcacaactgcaagaa
atgggcttctatgatacacaagagaatatcagagcacttcgtgctactgcgggaaacgtc
catgctgcagttgagagactcctgggaaattctgggcagtaa
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