Gossypium arboreum (tree cotton): 108479787
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Entry
108479787 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108479787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108479787
03036 Chromosome and associated proteins [BR:
gab03036
]
108479787
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108479787
Coactivators
SAGA/TFTC/STAGA complex
108479787
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108479787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
108479787
NCBI-ProteinID:
XP_052885144
LinkDB
All DBs
Position
1:77907404..77912253
Genome browser
AA seq
886 aa
AA seq
DB search
MDPSIVKFFEEDEDESMHSGADVEAFQAALNRDIEGDASTSQPPDSDTGSNRVSSQSLAQ
WPTVGQDGNANFQHQQPVQSAQQRSSEMEQKQQGLLVMGSLQQPNDVPQGVNCLPPQQKQ
PQDDHQQGVAEQVSAQVPLMAGIQTTERSPIPREPERTNIQDSESQYAKLQKMSNQQAGG
TEQPNNQVNRGKQVPFAVLLPSLLPQLDKDRAMQLHTLYGKLKKNEIAKDGFVRHMRDIV
GDQMLRLAVNKLQVQMSSNQVPLQSQVAARPNTPRMPSVGGATQFGGPHTLAQLHQKGPN
SPANSSHPSPPAVLMQTNSSYLSIENKVQKSQEMDRQPDSHFGVLKSQNPSSSSTTVNQE
RDRASIPVQGINMQQQHLNFAQTSFGMYGSSNYHTYSGSNVSNSGSCLKPQPHDSQIRQI
PHHQSMGSNPVGGPTQTMNMMGGPKLERQNSTNDPNRLQGGSISHFSSNSVSWQASSSKE
LNPGPLSSMTYVKQESVDQVPEQQHGLYLSATHGASTAIVEEGNAVNATPKDEFLEKQSS
RVGFSTPTSMAPPNLLSPSITTQMDSNLPLGSQSPSVPATAGVNGKAPQKKPCAGQKKPL
EALGSSPPLSSKKQKVSGGFSDQSIEQLNDVTAVSGVNLREEEEQLFSGPKDESRVSEAS
RRIVQEEEERVILQKIPLQKKLAEIMAKSGLKNISNDVERCVSLCVEERMHGLLCNLIRL
SKQPRHRTHVTSDVQQHIMMMNRNAREEWEKKQAEAEKLRKLNDPEAETTVDGDKEKDDG
RVKVVKANKEEDDKMRATAANVAARAAVGGDDMLSKWQLMAEQARQKREGGTDSLSGCQA
GKDVNCRPLSASGKNSRDYQESENRCPLSPPASGKLGSWLDLLIHG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatagttaagttctttgaagaagatgaggacgagtccatgcattcgggg
gctgacgttgaggcgttccaggctgccttgaatcgagatattgaaggcgatgcatccact
tctcagccacctgattcagataccggaagcaatcgagtttctagtcagtcacttgcacaa
tggccaaccgtggggcaagacggaaacgctaactttcaacaccaacaacctgttcaaagt
gcacagcagcgatcatccgaaatggagcaaaagcaacagggacttcttgttatggggagt
ctacaacagccaaatgatgttccgcaaggagttaattgtctaccaccacaacaaaagcaa
ccccaggacgatcatcaacaaggagtagctgaacaggtttctgctcaggttcctctaatg
gctgggattcagactactgaacgaagtccaatcccacgtgaaccggagagaaccaatatt
caagacagtgaatcacaatatgcaaaattacagaagatgagtaatcaacaggctggtggc
acagagcagccaaataatcaagtaaatcgaggaaaacaagttccatttgctgtgctgttg
ccgtccttactgccccaactcgataaagacagagcgatgcagcttcacaccctttacggt
aaactaaagaaaaacgaaattgcaaaagatggatttgtcaggcacatgagagatattgta
ggagaccagatgttgaggttggccgttaataagttacaagttcagatgagttccaaccaa
gtcccactacagtcccaggttgcagcaaggcctaatactccacgaatgccatcagttggt
ggtgccacacagtttggtggtccacatacattggctcagctgcaccaaaagggccctaat
tctcctgccaattcatctcatccctctcctccagcggtcctcatgcagactaattcaagt
tatttatccattgaaaacaaggttcagaagtctcaagagatggatcgtcaaccggattct
cactttggagtgctaaaaagtcaaaatccttcgtccagttcaaccactgtgaatcaagaa
agagatcgtgcttcaattcccgtacaaggaattaacatgcagcagcaacatctgaatttc
gcacaaacttcttttggtatgtacgggagtagtaattatcacacatactctggatcaaat
gttagtaattcaggttcttgtctaaagccgcaacctcatgactcacaaattagacaaatt
ccacatcatcaaagcatgggatcgaaccctgtaggaggaccaacccagacaatgaacatg
atgggtgggcctaagcttgagaggcaaaactcaaccaatgacccaaatagattgcagggt
ggatctatatcacacttttcaagcaattctgtttcctggcaagcctcatcaagtaaggag
ctgaatcctggccctttgtcatctatgacatatgtgaaacaggaatctgttgatcaagtt
ccagagcagcagcatggactttatttgtctgcaacccatggagcatctactgctatagtt
gaagagggtaatgcagttaacgctactcccaaggatgagtttttagagaagcaatcttct
agagttggcttctcaacacctactagtatggcacctcctaacttgctttctccttccatc
acaacacaaatggattccaatctcccgctgggttctcagagtccatctgtgcctgccacg
gctggggtcaatggaaaagcacctcaaaaaaagccctgtgctggccagaaaaagccgctt
gaagctcttggttcttcaccaccattgtcaagtaagaagcaaaaggtatctggaggcttt
tcagatcagagcattgaacaactgaatgatgtaactgctgtcagtggagtgaatctcagg
gaagaggaggagcaactattttccggccccaaggatgagagtcgagtttcagaagcatcg
agaaggattgttcaagaggaagaagaaagagttattttgcagaaaatccctttgcagaag
aaactggctgaaattatggctaaaagtggtttgaagaatataagcaatgatgttgaacga
tgcgtgtccctgtgtgtggaggaaagaatgcatgggctcctatgcaatttaatcagacta
tcaaaacagcctaggcaccggacacacgtcacctcagatgttcaacagcatattatgatg
atgaatcggaatgctagggaagaatgggagaaaaaacaagctgaggcagagaagctgcgg
aaacttaatgatcctgaggctgagactacagttgatggtgacaaggagaaagatgacggt
cgagtaaaagtagtaaaggcaaacaaggaggaggatgacaagatgagggccactgctgca
aatgttgctgcacgggctgctgttggaggggatgacatgctgtcaaaatggcaacttatg
gccgaacaagctcgccagaaacgcgagggtggaacagattcgctatctggttgtcaagca
ggtaaagatgtgaactgcaggcctctatctgcatctggaaaaaattcaagggactatcaa
gaatcggagaacaggtgcccactcagtcctcctgcatctggtaagcttggttcatggcta
gatctcttgattcatggttaa
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