Gossypium arboreum (tree cotton): 108479805
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Entry
108479805 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108479805
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108479805
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108479805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
DUF5575_C
DUF8068
zf-RING_16
DUF4692
Motif
Other DBs
NCBI-GeneID:
108479805
NCBI-ProteinID:
XP_017638091
LinkDB
All DBs
Position
12:87306148..87308300
Genome browser
AA seq
364 aa
AA seq
DB search
MHFILIYFNNLPSFVTGFSFLLAASSMASPPALLGVMGGAVTAAENNATLPSHPSSSSTE
NVKPSIIIIVSIFSITVIVSVCICLLLRHLNRRCLRHLSPSSTSTITASSAHRVSPEQSS
PPTTSLLDSLPLFTFSSITSRTNKDSTVSGDCAVCLSKFEPMDQLRLLPLCCHAFHAQCI
DTWLTSNRTCPLCRSPLLASDSDLIKLSLQFSNVSAVIGAGGSDSFRLEIGSISGRQPGS
ESVERGRSYSVGSFDYIVEEESEITRNQTHRRNLSDKEELGGAEPALEASLAGEVANERS
WLKDYVDRLSSSLSSRTMSFCSSGRFFTGSSRRSEISGATEDCDVEANCIGEEISEMFRW
FSGV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcatcctcatctacttcaacaaccttccttcttttgttactggcttttctttt
ttgttggcggcgtcatcgatggcttcgccacctgcgttgttaggcgttatgggaggagct
gtcacggcagccgaaaataatgccactttaccctcgcatccttcttcttcttcgactgag
aacgtgaagccgagtataattataatagtttctatattttccattacggtgattgtttcc
gtatgtatttgtcttctccttcgccacctcaatcgccgttgcttgcgtcacctctctcct
tcatctacgtccactatcaccgcttcttctgcccaccgtgtcagtcccgaacaatcatca
ccaccgacaacttcgttgcttgattcgcttcctttgttcacattctcttcaattactagc
cgcaccaacaaggattcaaccgtttccggagattgcgcggtttgtttgtccaaatttgaa
ccgatggatcaactcaggcttctccctctttgttgccatgcgttccatgctcaatgcatt
gatacttggctcacttcaaacagaacttgccctctatgtcgctcacctctcttagcttcc
gattccgatctcataaagctttcgcttcagttttctaacgtatccgccgtgatcggggct
ggcggcagcgacagtttccggctggagattggctccatcagtggccgtcaaccaggctcc
gaatctgttgaacggggaagatcttattccgttggctctttcgattatatcgtggaggaa
gaatcagagattactaggaatcaaacgcatcggagaaacttgtccgataaggaagaactt
ggaggagctgagccagctttggaagcgagcctcgccggggaagttgctaatgagaggagt
tggcttaaggactacgtggataggctatcttcttccttatcgtctcgtaccatgtcgttt
tgcagctcaggtaggttcttcaccggaagcagtcgccgaagcgaaatctccggcgccacg
gaagattgtgacgtggaagccaattgcataggtgaggagatcagtgaaatgtttcgttgg
ttctcaggggtatga
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