Gossypium arboreum (tree cotton): 108479847
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Entry
108479847 CDS
T05776
Name
(RefSeq) plant UBX domain-containing protein 10-like
KO
K18726
FAS-associated factor 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108479847
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
108479847
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UBX
UBA_4
FAF1
UBA_8
TAP_C
DUF4778
CDC45
Motif
Other DBs
NCBI-GeneID:
108479847
NCBI-ProteinID:
XP_017638157
UniProt:
A0A0B0PTJ6
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Position
1:30480578..30483772
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AA seq
459 aa
AA seq
DB search
MVDVADKLAYFQAITGLEDPDLCTEILQAHGWDLELAISSFTSSTQPSASSTVSDSDPPD
SRARTDSASASGPITAPAPGLAWRLVTLPISVISGSLGLISGAVGLGLWAAGGVLSYSLG
MIGLGSGQGGESSAGLVSVSAAASEAMDFVAAFEREYGTRGPNFVGEGFMDALQRSRNAF
KLLFVYLHSPDHPDSPVFCERTLCSEALAPFVNENFVAWGGSIRASEGFKMSNSLKASRF
PFCAVVMPATNQRIALLQQVEGPKSPEEMLTILQRVLEESAPVLVAARLDAEERRNNLRL
REEQDAAYRAALEADQARERQRREEQERLEREAAEAERKRKEEEEARERAAREAAEKEAA
RARMRQEKALSLGDEPEKGPNVTQVLVRFPTGERKERRFHSTAPIQAVYDYVDSLGCLEV
ENYNLVSNFPRVTYGTEKRSLTLKEAGLHPQASLFVELN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggttgatgtagccgataaattggcatattttcaagccatcacgggactcgaagatccc
gatttgtgtacggaaatccttcaggcccatggttgggaccttgaactcgccatctcttcc
ttcacctcttccactcaaccctccgcttcttccactgtctctgattccgaccctcccgat
tcacgggcccggactgattccgcctccgcctccggtcctattaccgctcccgcaccgggc
ttagcctggagactcgttacattaccgatttccgtgatatccggaagtttagggttgatc
tctggcgctgttgggctgggtctatgggccgcgggtggagttctttcgtattcccttggg
atgatcgggctaggctctgggcagggcggggaatcatcggccgggttggtatcggtctca
gctgcggcttctgaagcgatggatttcgtggcggcgtttgagagggagtacggaacgagg
gggccgaattttgtcggcgagggttttatggacgcgttgcagaggtcgaggaacgccttc
aagctgttatttgtgtacttgcactcgccggaccacccggattcgcccgtgttctgcgaa
aggacgttgtgttccgaggctctggcgccctttgtgaatgagaatttcgtagcgtggggc
ggaagcattagggctagtgaaggttttaagatgagtaatagcttgaaagcctccaggttc
ccgttttgtgcagtcgttatgcctgctaccaatcagaggatcgcgcttcttcaacaggtt
gagggacctaaatctcctgaagaaatgctcacaatactacagagagtgcttgaagaaagt
gctcctgttcttgttgctgcaagactagatgcagaagagagaagaaacaacctgcgttta
agggaggagcaagatgctgcttatagagcagcgcttgaagctgatcaggctagggaacgc
cagaggagagaggagcaagaacgactggaaagggaagcagcagaagctgagcggaaacgt
aaggaagaagaagaggctcgtgaaagagcagcacgtgaagctgctgagaaggaagctgcc
cgagctagaatgcggcaagagaaagccttgtcacttggtgatgaacctgagaaaggacct
aatgttacacaagttttggtacgttttcctactggagaacgcaaagaaaggaggtttcac
agtactgcaccaattcaagctgtttatgattatgttgattcattgggttgcttagaagtt
gagaattacaaccttgtctccaactttcctcgagtaacatatggtacagagaagcgctca
ctgaccttgaaagaggccggattacatcctcaggccagcctctttgtggagctaaactag
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