Gossypium arboreum (tree cotton): 108479871
Help
Entry
108479871 CDS
T05776
Name
(RefSeq) endoglucanase 6
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00500
Starch and sucrose metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
108479871
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
108479871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
108479871
NCBI-ProteinID:
XP_017638188
LinkDB
All DBs
Position
12:116386998..116391438
Genome browser
AA seq
626 aa
AA seq
DB search
MGKLMRLISMAPLFLLLCLPFAFGGHDYNQALSKSILFFEAQRSGYLPHNQRVTWRANSG
LNDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIIEYRKQMAANGELGHAMEAVK
WGTDYFIKAHPQPYVLYGEVGDGNSDHYCWQRPEDMTTDRHAYKIDPSNPGSDLAGETAA
AMAAASIVFRRSNPAYSRELLRHAYQLFEFADKYRGKYDSSITVAQKYYRSISGYNDELL
WAAAWLYQASNNKYYLNYLAKNGDSMGGTGWAMTEFGWDVKYAGVQTLVAKFLMQGKAGH
HTPVFEKYRQKAEYFMCSLIGKGSRNIQKTPGGLIYRQRWNNMQFVTSASFLATVYSDYL
TSYRGSLKCAAGNVAPSELLSFAKSQVDYLLGDNPRATSYMVGYGNNYPRQVHHRGSSIV
SIKVNPKFVACRQGYATWYTRKASDPNVLTGALVGGPDAYDNFADERDNYEQTEPATYNN
APLLGILARLAGGHGGYNQLLPVVAPVPNPVIAKPKPAPKPKRNPTPASSSSPITINQKM
TTSWNYKGKTYYRYSTVVTNKSYKTLKALKLSISKLYGPIWGLTKSGNSYGFPEWLNSLP
AGKSLEFVYIHAASPADVSVSSYNLA
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggggaagttaatgagactcatttcaatggctcctctgtttctgctactttgccttcct
tttgcatttggtgggcatgattataaccaagctttgagtaagagtattctcttctttgaa
gctcaaagatctggttacctccctcataaccagagagtcacatggagagctaactctggt
ttgaatgacggcaaggctagtggggtggatttggtaggagggtattatgatgcaggggac
aatgtgaagttcgggttgcctatggcattcaccgtaacaatgatgtcctggagcataata
gagtaccgcaaacaaatggctgctaatggtgagctcggccatgccatggaagccgtcaag
tggggcactgactatttcatcaaagctcatccccagccttatgtcctttacggagaggtg
ggagatggtaacagtgaccattactgttggcaaagaccagaggacatgaccaccgaccgt
catgcttacaagattgacccaagtaatcccgggtcggatctcgccggtgaaaccgccgcc
gcaatggcagccgcttccattgtcttccgccgctccaatcctgcctattccagagagctt
cttcgccatgcctaccagctgttcgagtttgctgataaatacagaggcaaatatgacagt
agtatcacagtcgctcaaaaatactaccgatccatcagtggctacaacgatgagttgttg
tgggccgctgcatggctgtaccaagctagtaacaataaatactacttgaactatcttgcg
aaaaatggtgactcaatgggtggaaccggctgggccatgaccgagttcggttgggacgtc
aagtatgctggggttcagacccttgtcgccaagtttttaatgcaaggtaaagctggtcac
catacaccagttttcgagaagtaccgtcagaaggcggagtacttcatgtgttcattgatc
ggaaagggtagccgtaatattcagaagactcccggtggtttgatttacagacagagatgg
aacaacatgcagttcgtgacaagcgcttcgttcttggcaaccgtctactctgattatcta
acttcctataggggaagcttgaagtgtgctgctggcaatgttgcaccatcggagcttctt
tcttttgcgaaatctcaggtggattaccttctcggagacaatccaagagctacaagctat
atggttggctacggaaacaattatccaagacaagttcaccaccgaggttcttcgattgtt
tcgatcaaggtcaaccctaaatttgttgcctgccgacaaggttacgcaacttggtataca
aggaaagctagtgatcctaatgtcctcaccggtgctttggtcggagggcctgatgcctat
gataattttgctgatgaaagagacaattatgagcaaacagagcctgctacctataacaat
gctccacttcttggcattttggctagattagctggtggtcatggtggatataaccaactc
cttcctgtggttgccccagtgcctaatcctgtcattgccaaaccgaaaccggcaccgaag
cccaaacggaatccaactcctgcctcatcttctagtccaattactataaaccagaagatg
acaacttcctggaattacaagggcaagacttactacagatattccacagtagtgaccaac
aagtcttacaagacattaaaggctctcaagctctcaatatcaaagctttatggtcccata
tggggtctcaccaagtctggcaattcttatggtttcccagaatggctcaactctttacct
gccggaaagagtcttgagtttgtatacatccatgctgcttctcctgctgatgtctctgtt
tcaagctacaatttagcttaa
DBGET
integrated database retrieval system