Gossypium arboreum (tree cotton): 108479877
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Entry
108479877 CDS
T05776
Name
(RefSeq) homeobox-leucine zipper protein HDG2-like isoform X2
KO
K09338
homeobox-leucine zipper protein
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108479877
Transcription factors [BR:
gab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
108479877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
Cnn_1N
MRP-L20
HTH_Tnp_1
Motif
Other DBs
NCBI-GeneID:
108479877
NCBI-ProteinID:
XP_017638204
LinkDB
All DBs
Position
3:40897134..40902537
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AA seq
756 aa
AA seq
DB search
MPAGVMIPARNMPSMITGNGSVSGYGTSSGLTLGQPNNMMEGQLHPLEMTQNASESEIAR
MRDEEFDSTNKSGSENHELGGSGDDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDK
QRKELGRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSTA
SCPNCGGPTAVGQMSFDEHHLRLENSRLREEIDRISAIAAKYVGKPVVNFPLLSSPALPR
PFDFGSQPVTEEMYGVGDLLRSISAPSEADKPMIIELAVAAMEELVRMVQMGEPLWMTSL
DGTTCMLNEEEYIRTFPSGIGPKPTGFKCEASKETTVVIMNHINLVEILMDVNQWSTVFS
GIISKASTLDVLSTGVAGNYNGALQVMTAEFQVLSPLVPTRESYYVRYCKQHAEGTWAVV
DVSLDTIRPSPTVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDGGVHNLYKQLVSSGHA
FGARRWVSTLDRQCERLASLMASNIPTGDVGVITNQDGRKSMLKLAERMVISFCGGVSAS
TAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVSPKRVFDFLRDEHSR
SEWDILSNGGAVQEMAHIANGRDPGNCVSLLRVNSANSSQSNMLILQESCTDPTASFVIY
APVDIVAMNVVLNGGDPDYVALLPSGFAILPDGMTVTDVGMADSGGSSGSLLTVAFQILV
DSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNA
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgccagccggagtaatgatcccggcaagaaacatgccgtcgatgatcaccggaaacggg
agcgttagtggatatggaacatcctcaggacttacacttggtcagcctaacaacatgatg
gaaggtcaactccaccctcttgagatgacccaaaacgcttctgaaagtgaaattgctcga
atgagagacgaagaattcgacagtacaaacaaatctggtagcgaaaatcatgaattaggt
ggctctggagacgatcaagatcctcgtcccaacaaaaagaagcgttatcatcgccatacc
cagcatcagatccaagaaatggaggcatttttcaaagagtgtccacacccagatgacaag
caaaggaaggagcttgggcgtgagttagggttagaaccgttgcaagtcaaattctggttc
caaaataagcgcacacaaatgaagactcagcatgagcgtcacgaaaacacacagctgcga
actgagaacgagaagctaagggctgacaacatgcgatatagggaagctttgagcactgct
tcatgcccaaattgtggaggtccaactgctgttggacaaatgtcatttgatgaacatcat
ctcagacttgagaattctcgattaagggaagagattgatcgtatatcagcaatagctgca
aagtacgtgggcaagccagtggtgaactttcctctactttcatctcctgcgcttcctcga
ccatttgatttcggttcacaacctgtcaccgaggagatgtatggtgttggggatcttctc
aggtctattagtgcaccttccgaggccgataagccaatgattattgagcttgcggtggca
gctatggaggaactggttagaatggttcagatgggggaacctttatggatgaccagtctt
gatggtaccacctgtatgctgaatgaagaagagtatattaggacttttcctagcggaatt
gggccaaaacctactggctttaaatgcgaagcttcaaaagaaactactgttgttatcatg
aaccacattaaccttgttgagattctcatggatgtgaaccagtggtcaactgtgttttcg
ggaataatttcgaaggcttcaactttggatgttctctcaacaggagtagcagggaattat
aatggagcccttcaagtgatgacagctgaatttcaagttctttcacctcttgttcccact
cgtgagagttattatgtaagatactgcaaacagcatgcagagggaacttgggctgtagtt
gatgtttctttggatactatacgccccagtcccactgtgagatgcagaagaagaccatct
ggttgcctaattcaagaaatgcccaatggctactcgaaggttacatgggttgagcatgta
gaagtggacgatggaggtgttcacaatctgtacaagcaactggtaagctccggccatgct
ttcggagcaagacgatgggtttctactttagatcgacagtgtgagaggcttgcaagttta
atggcttctaacattcccaccggcgatgttggggtgataacaaaccaagatgggagaaag
agtatgctgaagctagctgagcgaatggtaatcagtttctgtggaggagttagtgcctct
acagcacacacgtggacgacattatcgggaactggggctgatgatgtaagggtgatgacc
cgaaagagtgtagatgatccaggtagacctccagggattgtgcttagtgctgcaacgtcg
ttttggctccccgtttcacctaagagggtttttgatttcctcagagatgagcattctcga
agtgagtgggatattctgtctaatggcggagctgtacaagaaatggcacacattgctaat
ggtcgggatccaggcaattgtgtttcactacttagagtaaatagtgccaattcaagccag
agcaacatgctgattttacaagagagttgcactgatccaacagcctcttttgtgatctat
gctcctgttgatattgttgcgatgaatgttgtcctaaatggaggggatccggactatgtt
gctcttcttccctcgggtttcgcaatactgcctgatggaatgactgtgactgacgtagga
atggctgattccggcgggtctagtggatctcttctaactgttgcatttcagattttggtc
gattctgtgccgacggcaaaactttctctaggatccgttgcaacagtaaacaatttgatt
gcatgcaccgttgaaaggataaaggcatctctgtcatgcgataatgcatga
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