Gossypium arboreum (tree cotton): 108480123
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Entry
108480123 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108480123
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108480123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108480123
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
108480123
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
108480123
NCBI-ProteinID:
XP_017638494
UniProt:
A0A0B0NRU8
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Position
6:269891..273936
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AA seq
549 aa
AA seq
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MRRSRKDGDSVDEERDSRRRRIVDSPSSPAEEPLVPYNDDEDDERRVLDHSGGAEEVGRR
VETEEEDDDDADDPYGRGSILDKSNRQVEVRRDCPYLDTVNRQVLDFDFERFCSVSLSNL
NVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEINDPSLDDIRY
VLNPRFSREQVEQLDKNKQWSRALDGSDYLPGMVGLNNIQKTDFVNVTIQSLMRVTPLRN
FFLIPENYQHCRSQLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGVQSE
PVEFMSWLLNTLHADLRTSKKSSSIIHKCFQGELEVVKETQNKAISEKKEGGGEHNGALK
IMDGATENNNIGTETYRMPFLMLGLDLPEPPLFKDVMEKNIIPQVPLFNILKKFDGETVT
TTVRPPARMRYRVIRLPQYLIVHMRRFTKNNFFREKNPTLVNFPVKNLELKDYIPLPAPT
KENEKLRSKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEA
YMQIYEQQQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagcaggaaagatggtgatagtgtagatgaggaacgagactcaagacggcgg
aggattgtggattctccttcttcacctgctgaagaaccgcttgtgccttacaatgatgat
gaagatgatgaaaggagggtattggatcacagtggtggggcagaagaagttggccgaagg
gttgaaactgaagaagaagatgatgatgatgccgatgatccatatgggagaggatcaatt
ttagacaaatcaaatcgccaggttgaagtacgaagagactgcccttaccttgatactgtt
aaccgccaggtgctagattttgattttgagaggttttgttcggtctctttgtcaaatttg
aatgtgtatgcatgtctggtatgtgggaagtattaccaaggaagagggaagaagtcccat
gcttatactcatagtctcgaagcaggacatcatgtctatatcaatcttcgaaccgagaag
gtgtattgtctccctgatggatatgaaattaatgacccgtcattagatgatatacgatat
gttctaaacccaaggttttccagagaacaagttgaacaacttgacaagaacaagcaatgg
tctagagcacttgacggttcagattaccttccaggaatggtgggattgaataatattcaa
aaaactgattttgtcaatgtcaccattcaatctttaatgagagttactcccttgaggaac
tttttcctcatccctgaaaattaccagcactgtagatctcagcttgttcatcgatttggg
gagctcacacgaaagatttggcatgctcgaaactttaaaggacaggtgagccctcacgag
tttctacaagccgttatgaaagccagtaaaaaacggtttcgaataggtgtccagtctgag
ccggtagagtttatgtcatggcttcttaatacactgcatgcagatcttagaacttcaaag
aaaagtagcagcatcatccataagtgctttcagggggaactggaggttgtaaaagagacg
cagaacaaagctattagtgagaaaaaagaaggtggtggggaacacaatggagctctgaag
attatggatggtgcaactgagaataataacattggtaccgaaacttacagaatgccattt
ctgatgcttggattggatttaccagaaccacctcttttcaaagatgtgatggagaaaaat
ataatacctcaggttcctttgttcaatatattgaagaagtttgatggtgagactgtaacg
acgactgttcgtcctccagcgaggatgagataccgtgtcatcagattgccacagtacttg
atagttcacatgcgccgctttactaagaataatttcttcagagaaaagaatccaacattg
gttaactttcctgtgaaaaacctagagttgaaggactacattcctctgccagcaccgacc
aaagagaatgaaaagttgcggtccaagtatgatctgattgctaatatcgttcatgatggt
aagcctgatgaggggttctacagggtcttcgtacagcggaaatcagaagaactatggtat
gaaatgcaggatctgcatgtttctgaaacacttcctcagatggttgcattgtctgaagct
tacatgcagatatacgaacagcaacagtag
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