Gossypium arboreum (tree cotton): 108480133
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Entry
108480133 CDS
T05776
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108480133
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108480133
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
ARM_TT21_N
AEP1
Tn7_Tnp_TnsA_C
Motif
Other DBs
NCBI-GeneID:
108480133
NCBI-ProteinID:
XP_017638502
UniProt:
A0A0B0Q3J8
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All DBs
Position
1:complement(123006512..123009995)
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AA seq
836 aa
AA seq
DB search
MDMQQMIIAANRAQCFVSPPLSTLIITINTPSLNPNKPSKTPMRTSLSFLRLFRPLSRSQ
TVLFRPLTRRYAAPRFCPSFSRHFSVSSAPFSASAVGFVDEKEREEEERWDFSNNETEAK
FVFEDNDGVFADNDMKHLVAPDIEVKELDELPEQWRRSKLAWLCKELPAHKAGTLVRILN
AQRKWLKQEDATYLAVHCMRIRENETGFRVYKWMMQQHWYRFDFALATKLADYMGKERKF
TKCREIFDDIINQGRVPSESTFHILIVAYLSTPVQGCLDEACGIYNRMIQLGGYQPRLSL
HNSLFRALLNRPGGSSKYYLKQAEFIFHNLETCGLEIQKEIYTGLIWLHSYQDTVDKERI
KSLRKMMRESGMEEGKEVLISILRACSKDGDIEEAERTWIKLLGSNDSIPSQAFVYKMEV
YSKVGEITKSLEVFREMKKCLGYTSIASYHKIIEVLCESEQMDLAESFMKELIESGMKPL
MPSYIKLTDTYLRLNCHDKLESTFLECLEKCRPNRTIYNIYLSSLVKVGNLGKAEEIFNH
MGENVTIGVNAKSCNTILCGYLSSGDNSKAEKIYDLMCQKKFEIESPLMEKLENVLRSSR
KEVKKPLSLKLSKEQREILMGLLLGGLRIDSDEERKNHMIRFEFNPSSIPHSILKRHIHD
QYHEWLHPSSKLTAGNGDILHKFNTISHSYFGFYADQFWPKGQPVIPKLIHRWLSPIVLA
YWYMYGGYRTSAGDILLKLKGSSEGVEKVVKTLKSKSLNCRVKRKGRVFWIGFLRTDSMW
FWKLVEPYILDDLKDFLKAGSETADDCAVESRDINFDSASDSDEKGSSDCSEDLNP
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcagcaaatgataatagcagcaaacagagctcaatgcttcgtttccccgcct
ctttcaaccctcataatcaccatcaataccccttctttaaaccctaataaaccctccaaa
acccccatgcgcacttccctctctttcctccgcctcttccgccctctttcccgctctcaa
accgtccttttccgccccctcacccgtcgctacgccgcgcctcggttttgcccttctttt
tcccgccacttcagtgtatcttcagccccattctcagcctccgccgtcggtttcgttgac
gaaaaggaaagggaagaagaagagaggtgggatttctccaacaacgaaaccgaagcgaaa
ttcgttttcgaagacaatgatggggttttcgcggataacgatatgaagcacttggtggca
ccggatattgaggttaaggaactagacgagttgccggagcagtggcgaaggtcaaagctc
gcttggctttgcaaagagttgccggctcataaggcgggaaccttggttaggatcttgaat
gcgcaaaggaagtggctcaagcaagaggatgctacttacttggctgttcattgtatgaga
attcgagaaaatgaaactggtttcagggtctataagtggatgatgcagcagcattggtat
cgattcgattttgctcttgctaccaagctagcagattacatggggaaggagaggaagttt
acgaaatgtcgggagatattcgatgacatcatcaaccagggacgtgtgcctagtgagtct
acgtttcatattctgattgttgcatatcttagtacaccggttcaaggttgtttagatgag
gcttgtggtatttacaatcgtatgattcagttaggaggataccaaccacgtcttagctta
cataactcgcttttccgagctcttttaaacagaccgggaggttcttcaaaatattactta
aaacaagccgagtttatctttcacaatttagaaacatgtggtttagagatacaaaaagaa
atctataccggcctaatttggttgcatagctatcaagatacggtggataaagaaaggata
aaatcgttgaggaaaatgatgcgagaatcgggtatggaagaaggaaaagaagtgctcatt
tcgatattgagagcttgttcgaaggatggggatattgaagaagccgaaagaacttggatc
aaactactcggttccaatgatagtatcccttctcaagcttttgtctataaaatggaagtt
tattcgaaggttggggaaattacgaaatctttggaggtattccgggagatgaaaaagtgt
ttgggatatactagcatcgcatcataccacaaaattatagaggtattatgtgaatccgag
caaatggaccttgcggaatcgttcatgaaggaactcattgagagtggtatgaagccactt
atgccatcgtacatcaagctaacagatacatacctccggttgaactgtcacgataagctc
gagtcgacctttttagagtgccttgagaaatgccgaccgaatcgtactatttataatata
tacttgagctcgttggtgaaagtcgggaatctcggcaaagcggaggaaattttcaatcac
atgggcgagaatgtcacaattggtgttaatgcaaaatcatgcaataccattttatgtgga
tacctttcttccggagataattcgaaagcagaaaagatatatgatttgatgtgccagaag
aaattcgaaatcgaatctccgttgatggaaaagttggaaaatgtccttagatcgagccga
aaagaggttaagaaacccttgagcttaaagctaagcaaagaacaacgagagattttaatg
gggttgcttttaggcggtttacggatagactcagatgaagagagaaagaaccacatgata
cggttcgagtttaatccaagttctataccacattctattttaaagagacatattcacgat
caataccacgagtggttacatccttcaagtaagctaactgccggtaatggtgatatcctg
cacaagttcaataccatttcacactcttatttcggtttctatgcggaccagttttggcca
aagggtcaacctgtgatcccaaagctaatacaccggtggctgtctccgattgtacttgca
tactggtatatgtacgggggctacagaacatcagccggggatatccttttgaaactgaaa
gggagcagcgaaggcgtcgagaaagtggtgaaaacgttgaaatcaaaatccttgaattgc
cgagtgaagcgaaaagggagagtgttttggatcggatttctcaggactgattcaatgtgg
ttctggaaactggtggaaccttacatcttagatgacttaaaagattttctcaaagcaggc
agcgaaaccgcagatgattgtgcggtcgaatctcgagacataaactttgacagtgcatcc
gattccgatgaaaagggttcttccgattgtagcgaagaccttaatccataa
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