Gossypium arboreum (tree cotton): 108480183
Help
Entry
108480183 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108480183
KO
K19022
AP-5 complex subunit beta-1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108480183
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
108480183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
108480183
NCBI-ProteinID:
XP_017638571
LinkDB
All DBs
Position
4:122065401..122070412
Genome browser
AA seq
1115 aa
AA seq
DB search
MAEKPPPKPILPQDWESLVEDFQYGGFRREKWRSLSPSVVELALSSILKKEFPFKIPLVI
FLEEFSDLLFPQDPSLASLMDRLVETLRAVVQSPTDGVHVTYALKEQMMVSTTSILISTN
SVESVEVRFTESVVELLLAVINRPNHGPDRHARATACECLRELEKAYPCLLSDIAGHLWS
LCQSERTHASQSYILLFTTVIHSIVNRKLSVSILNTSVPLIPFNVPQCIGELEKEGLLEL
NYKELRRAMAFLLEWPQVLTPCGMMIFMGMIMPLAVALDLQSSMLKVQFFGMIYSFNPLL
YHVVLVMYSHFSEAFNEQEIEIVRRLYLVSLETQQHLVFRLLSVHWLMVFLNRLMVEKKK
SIVEMGFMFYPSVFDPLSLKALKLDLLAFCSVCIDKLNPQSVSDMEGNSVVKLFQDGLVS
VLGFKWLPPWSTETAVAFRTFHKFLIGASSHSEADPSTTTALMESAIFNHLKGMFVDLIL
EFQRLVPVIVAFIDRLLGCQRHLWLGERLLQTIDASLHSRVAIDYRLVSYFSIFDRIAEN
QTIPPRRLLELLTKFMAFLVEKHGPDTGVKSWSRGSKVLGICRTMLTHHQSSRLFLGLSR
LLAFTCLYFPDLEVRDHARIYLRMLICVPGVKLRGMLNLGEQLLGISPSSHSGSFFNVPS
PRHSQDPKKLKNIASYIHLERMIPLLVKQAWSLSLLPLRVGSNKPEFSGGFRDGGASTDE
RELDATIQFETVLDGQVMDKPQAPLYVMDSKVSEILAILRRHFSYIPDFRHMPGLRVKIP
CYLRFDAESFNNDWGSESPKSGLHGVDALPAIYATVLKFSSLAPYGSIPTCHIPFLLGQP
PTSGDFRGENFSLDIIATHDSDGGSEEDIYKAPAMIELEPREPTPGMVDVFIETNGEDGQ
IITGQLQSITVGIEDLFLKAIAPPDIPEDVLPDYYSDLFNALWDACGTTSNTGREIFPLK
SGKGFAAIHGTRSVKLLEIPPYALIRATEHYLAPFVVSVSGDRLIDMVKDNGIIRDVVWQ
DEASGLLLEAPTSVAEPDSMPLYITLVENEEEQESQLNIGKRSLGCIHVLIFLPPMFHLL
LQMEVSDASTLVRIRTDHWPCLAYIDDYLEALFLS
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccaccgccaaaaccgattttacctcaagattgggaatctttagttgaa
gatttccagtacggcggtttccgccgcgagaaatggcggtccctgtccccttccgtcgtc
gaactcgccctttcatcgatcctcaaaaaggaattccctttcaaaatccctctcgtaatc
ttcctcgaggaattttccgatctattgttcccccaagatccatcactcgcttcccttatg
gaccgcctcgtcgaaaccctacgcgccgttgtccaatccccgaccgacggtgtccatgtc
acttacgcattgaaagaacagatgatggtttcgacgacctcgattttgatctctaccaac
tcagtcgagtccgtcgaggttcggtttacggaatccgtcgtcgaacttttattagcggtt
ataaaccggccgaaccatggaccggaccgccacgcacgtgccactgcttgtgagtgtcta
cgtgagttggagaaagcttacccttgtttactctctgatattgctggtcatttatggagc
ttatgccaaagcgaacgaacccatgcttcgcaaagttacattttgttgtttacaactgtg
attcatagtatcgtgaatcgaaagttaagtgtttctattttgaatacttcggttcctttg
attccttttaatgtaccgcaatgcattggagaattagaaaaggaagggctgttagagttg
aattataaggaattgagaagagcaatggcgtttttattggaatggccacaagttttaact
ccttgtgggatgatgatttttatgggaatgataatgccattagcagtagctttagattta
cagtcttctatgcttaaagttcagttttttgggatgatttattcatttaatcctttattg
tatcatgttgttttggtcatgtattcgcatttttccgaagcatttaacgagcaggaaatt
gagattgtgagaagactttatttggtttcattggaaacacagcaacatttggtgtttcga
ttgctttcagtgcattggttgatggtttttctgaataggttgatggtcgagaagaagaag
tcgattgtagaaatgggtttcatgttttatccgagcgtgtttgatccactttcgttgaaa
gcattaaagctagatttacttgctttctgttctgtttgtatcgataagttgaatcctcaa
agtgtttcagatatggaagggaattcggtagtgaagctctttcaggatggtctagtatca
gttttgggtttcaaatggttgcctccttggagcacggaaactgcagtggcattccgtact
ttccataaatttttgataggcgcatcatctcattccgaggctgatccttccaccaccact
gcacttatggaatccgccattttcaatcatttaaaggggatgtttgttgacttgatactg
gagtttcagagattggttccagtcattgttgcttttattgaccgtttgttaggctgtcaa
aggcatctttggttgggagaacgtctgcttcaaacgatcgatgcgagtctgcattcaaga
gttgcaattgattatagactagtttcatacttctcgattttcgataggattgctgaaaat
caaacaatacctccgcgtaggttgttagagctactaaccaagttcatggctttccttgtt
gagaaacatggaccagacacaggtgtaaaatcttggtctcggggtagtaaggtcctcggc
atttgcagaaccatgctaactcaccatcagagctctcgtttattccttggtttatcccgt
ctcctggcgttcacctgcctttacttccctgatttggaggttcgtgaccacgcaaggatc
tacttgaggatgctgatttgtgtacccggagtgaagcttagaggaatgctaaaccttggg
gagcaactccttggtatttccccctcgtctcattccggatcattcttcaacgtgccatct
cctcgacattctcaagatcccaagaaattaaagaacatcgcatcctatatccatctcgag
cggatgataccactacttgtcaaacaggcttggtcgttgtctttattacctttaagggtc
gggagtaacaaaccagaattttctggtggctttagggatggtggagcctcgacagatgaa
agagaacttgatgccactatacaatttgagactgtattagatggtcaggtaatggataaa
ccacaggcgccattatatgtgatggactcgaaagtttcagagattttagcgatattaagg
agacatttctcgtatattcctgattttagacatatgccggggcttagggttaaaattcct
tgctatttgagatttgatgcggagtctttcaataatgattggggaagtgagtccccgaaa
agtgggttacacggagtagatgccctccctgccatatatgctacagtattgaaattctca
tcgttggcaccatatgggtcaattccgacatgtcatataccctttcttctcggtcaacct
ccaactagtggtgattttcgtggtgaaaatttttcactagacatcattgctacacatgat
agtgatggtggtagtgaagaagatatctataaagctcctgcaatgatcgaattggaacca
cgtgagccaactcccggtatggttgatgttttcattgaaacaaacggggaagatggtcaa
atcatcacaggacagttgcaaagtattacggttggcattgaagatttgtttcttaaagct
attgccccaccagacatcccagaagatgttttacctgattactattcagatttgttcaat
gccttgtgggatgcatgtggtactacttccaataccgggcgggagattttccccttaaag
agtggcaaagggtttgctgccattcatggaaccagatccgtgaagttgcttgagattcct
ccatatgctttaattcgtgccactgaacattatctggcaccatttgtagttagcgtgagc
ggagatcgtctcattgacatggtaaaggataatggaattatcagagacgttgtatggcaa
gatgaagcctctggacttttgcttgaagcccccacctcagttgccgaacctgacagtatg
cctctttatattactttagtcgagaacgaagaagagcaggaaagtcagttaaacattggc
aaaagaagtctcggttgcatccatgtcttgatttttcttcccccgatgttccatctcttg
ttacaaatggaagtaagtgatgcttcgactttagttcgtattcgcaccgatcattggcca
tgcttagcttacatcgatgattacttggaggcattgtttttgtcataa
DBGET
integrated database retrieval system
