Gossypium arboreum (tree cotton): 108480301
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Entry
108480301 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108480301
KO
K03504
DNA polymerase delta subunit 3
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03030
DNA replication
gab03410
Base excision repair
gab03420
Nucleotide excision repair
gab03430
Mismatch repair
gab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108480301
03410 Base excision repair
108480301
03420 Nucleotide excision repair
108480301
03430 Mismatch repair
108480301
03440 Homologous recombination
108480301
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108480301
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108480301
03400 DNA repair and recombination proteins [BR:
gab03400
]
108480301
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108480301
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
108480301
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
108480301
MMR (mismatch excision repair)
DNA polymerase delta complex
108480301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
108480301
NCBI-ProteinID:
XP_017638738
UniProt:
A0A0B0N3W8
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Position
1:117610847..117616064
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AA seq
537 aa
AA seq
DB search
MTQIETLGILEEIQALVSDKLQVVSYKWLSRHFLVSSNVAKRLLAEFVEKHGSGLEVVYS
LSGWLKNSPSNYHIQLVSRHKLSEAKQEYDGNCRADVYSVQVCIPEDPAAIWNTEFLQAE
ELFKRPAPVDNCLRDNRFCGISASFVKRNVDGTTARVAAAQPDSAGTSGPSKQNSSQTNA
ALPSQQNKVLQSSSKVAQHTPIMVKDVKSDGIREVHNLAVKPSTDKKKTTSLPSNKNKDQ
NGKSSTGNEGSLATLWGRACTKPKSSSVPEVGCDSIQNFNGTADAQICAREAVEDENSDL
DAYEVNFRRASYSEGNKKRRVVFDFSDEDENEDAVNLASPDPPERKSLLGSEQDSKTLVP
ERPNSIVDKPNKDEVNIKEETMTDGEPNISLREETSLVSKRTNGRNSVVKLESQLPDTAP
NKMDEVTDAAPNSPKRRKVIKTHIDDHGGEVNEVVWEGEETEVKKVENHMPKKVGSGTTN
AEANTVTNTTNRPTAPQRSPAVGSTAPSNPGGKAGNKKAGNAKDPKQGNILSFFKKA
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaattgaaaccctaggtattcttgaagagatccaagctctcgtctccgataaa
cttcaagtcgtatcctacaagtggttgagtcgtcattttctggtctcatccaacgttgca
aagagattgcttgctgagtttgttgaaaagcatggaagtggattagaagttgtatatagt
ttgtctggctggttgaagaactctccatcaaactatcatattcagcttgtatcaagacat
aaactttcagaagccaagcaagaatatgatggcaattgcagagctgatgtatacagtgtg
caagtttgcattccagaggacccagctgcaatttggaatactgaatttctacaagctgaa
gagctcttcaagcggcctgccccagtggataattgcttgagagataataggttctgtggg
atttcagcttcatttgtcaagcgcaatgttgatggaactactgcaagggttgctgctgca
caaccagatagtgcgggaacctcaggaccatccaaacagaattcttctcaaaccaacgca
gctttaccatctcaacaaaataaagttctgcaatcaagctcaaaagttgctcagcatact
cccattatggtaaaagatgtcaaaagcgatggtattcgtgaagtccataatctggccgtc
aagccttctaccgataaaaagaaaactacttccttgccttctaataaaaacaaagatcag
aatggtaaaagctccactggaaatgaaggatcattagcaactttatggggtcgtgcatgt
acaaaaccaaagtccagttctgtgccagaagttggttgcgattccatccaaaatttcaat
ggtactgcagatgcacaaatttgtgctcgtgaagcagtagaagacgagaacagtgacctt
gacgcttatgaggttaatttcaggagagcttcttatagtgaaggcaataagaagcggagg
gtagtttttgatttctcagatgaagatgagaatgaagatgctgtcaatctagcttcacct
gatccccctgaaaggaaatcacttttaggttcagaacaagattctaaaactttggttcca
gagaggcccaattcaattgtagacaagccaaacaaggatgaagtaaatattaaggaagag
acaatgactgatggagaacccaatatatcattgagggaagaaacttcacttgtcagcaaa
cgcacaaatggtagaaattctgtggttaagcttgagagccagcttcctgacactgctcca
aataagatggatgaagtgactgatgctgcacccaattcacctaaaaggaggaaggtgata
aaaacacatatcgatgaccatggaggagaagtaaatgaggtagtttgggaaggcgaagag
acagaggtgaagaaagttgaaaatcatatgccgaagaaagttggaagtggaacaaccaat
gctgaagccaatactgttacaaataccactaacaggcctactgcaccccaaaggtctcct
gctgttggaagcactgcaccatctaatcccggaggcaaagccggaaacaagaaggctgga
aatgcaaaggatcctaagcaaggcaacattctatctttcttcaaaaaggcttga
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