Gossypium arboreum (tree cotton): 108480325
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Entry
108480325 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108480325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108480325
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108480325
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
HECT type E3
108480325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
HEAT_2
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108480325
NCBI-ProteinID:
XP_017638763
LinkDB
All DBs
Position
1:123259044..123268352
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AA seq
1883 aa
AA seq
DB search
MKFRTRKRAETFTAAPSSSSSSFDPTIRSNKRVRLSSSSAVATITGTRVSRASGLLMDSV
TAESSSGSRGGSGEDKRTVSESLNLVSDKGKEKEEDLRISNRETDRDSGDNNESNSNHLE
GSSGLNMETSGGDEDDHNDDRGDVGSLQQNLPSASSALQGLLRKLGAGIDDFLPSSPMGS
SSSSHQNGRLKRILSGMSADGEEGGQVEALIELCEILSIGTEESLSTFSVDLFVPVLVGM
LNHESNPDIMILAARALTHLCDVMPSSCAAVVHYGAVSSFCAKLLTIEYIDLAEQSLLAL
KKISQEHPTPCLRAGALMAVLLYLDFFATGVQRVALSTAANMCRNLPSDAADYVMDAIPP
LTNLLQYHDSKVLEHASVCLSRISEAFASSPDKLDELCSHGLVTQAASLISTSNSGGGQG
SLSIPTYTGLIRLLSTCASGSPVGAKTLLMLGISGILKDILVGSDISANSAVPPTLSRPA
EQIFEIVNLAKELLPPLPQGTISLPASSNIFFKGSIVKEAPTSSSEKEDNTDGNASEVSA
REKLLHKQPDILQQFGMDLLPVLIQIYGSSVNTPIRHKCLSVIGKLMYFSSAEMIQNLLS
VTNLSSFLAGILASKDPHVLVPSLKIAEILLEKLPATFSKMFVREGVVHAVDQLVLIGNQ
NNTPSLASYVEKDNDSISGMSSRSRRYRRRSYNSNPEGSSVEESKNPASLNIGSPPSSVE
TPTTNLRTVVSGCAKAFKDKYFPSEPGAVEVGMTEELLHLKNLCMKLNAGVDDQKTKAKG
KSKDSGSQLADISAAKEEYLIGVISEILAELSKGDGVSTFEFIGSACVAALLNYFSCGYF
YKGIISDGNLPKLRHQALKRFKLFISVALPSSVDERSIAPMVVLVQKLQNALSSVERFPV
VLSHASRSSGGSARLSFGFSALSQPFKLRLCRAHGEKSLRDYSSSIVLIDPLASLATVED
FLWQRVQRSDTAQKLSISVGNSESGNTSSGAATSSPSTTTPASDTRRHFSRSRSSVSIGD
TATKEPSSQENSTRLSNGKGKVVLEMAQERLRGPQTRNAALGKDDPMKPVNGVSTSEDEE
SDTFPVEVDDVWGVEDDDISDDEEDSHEDVLRDDSFPVCMPDKVHDVKLGDSAEDGKPAS
AIRDSQINTASGSSSRAAAVKCSDSADFRSAYGSKGAKSFAAAAMAGLGSVNGRGIRGGR
DLEGQHPFGSSNEPPKLTFTAGGKQLKRHFTIYQAIQGQLVLDEDEDDERCAVSDISSEG
SRLWSDIYTITYQRADGQADRSSVGGSGSITESKSNKSGSSSSNSVPQTHRMSLLDCILQ
GELPCDLERSNPTYNILALLRALEGLNQLAHRLRFQIFSDNFAEGKISNLDELILTGSRV
PSEEFINGKLTPKLARQMQDALVLCSGNLPSWCYQLTESCPFLFPFETRRQYFYSTAFGL
SRALHRLQQQQSADGHGSTNDREVRVGRLQRKKVRISRDRILDSAAKVMRMYSVQKAVLE
VEYFGEVGTGSGPTLEFYTLLSHELQKFELGMWRSNSTWNKSLMEIDGDEKKEGKTAGST
TIDGVMIQAPLGLFPRPWQLNADASEGSEFSKIIEYFRLVGRVMAKALQDGRLLDLPLST
SFYKLVLGEELDLHDIPSFDSEFGKTLLELHLLVCRKKYLELMGDDSGDAIADLRFRGAP
IEDLCLDFTLPGHPDYILKPGDETVDINNLEEYISLVVDATVKTGIMRQMEAFRAGFNQV
FDIASLQIFTPQELDYLLCGRRELWEAETLADHIKFDHGYTAKSPVIINLLKIMGEFTPD
QQRAFCQFVTGAPRLPPGGLAVLNPKLTIVKKHSSPSESVDDDLPSVMTCANYLKLPPYS
TKEILYKKLLYAISEGQGSFDLS
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcggacccggaagcgggcggagacattcacagctgccccttcttcttcttct
tcttcctttgatcctacaattcgctctaacaagcgcgttcgtttgtcttcctcctctgcc
gttgctaccatcaccgggactcgcgtttcacgggcttccggtctcttaatggactccgtt
acagcggaatcttcatctggttcccgcggaggttctggcgaagacaaacgaaccgtaagt
gaaagtctgaatctcgtctctgataaaggtaaggaaaaggaggaggatttaaggatttcg
aatagagagactgatagggatagtggagataataacgagagtaattcgaatcatcttgag
ggaagctcagggttaaatatggagacctctggaggcgatgaggatgatcataatgacgac
agaggcgacgtggggagtttgcaacagaatctgccgtcagcgagcagcgcattacaaggc
ttgttgaggaagttgggtgccggaattgatgattttcttccctcatcgccaatgggctca
tcgtcgtcatctcatcaaaatgggaggttgaagaggattctgtctggaatgagtgctgat
ggggaggaaggggggcaggttgaggcgttgatagagctctgtgagattctttcaattggg
actgaggagtcattgagcacgttttctgtggatttgttcgttcccgttctcgttggaatg
cttaatcatgagagtaaccctgatataatgattcttgcggcaagggcgcttactcattta
tgtgatgtgatgccttcttcctgtgctgctgtggtgcattatggtgcagtttcatctttt
tgcgctaagttgcttacaatagagtatatagacttggctgaacagtctctgctagccttg
aagaagatatctcaagaacaccctactccctgtttgcgagctggtgctctcatggcagtg
cttttatacctggatttctttgccactggagttcagcgtgtggctctatctactgctgca
aatatgtgcaggaatctcccttcagatgcagctgactatgtaatggatgctataccacca
ttaacaaatcttttgcagtatcatgattcaaaggtgttggagcatgcttctgtttgtctg
agccgtatttctgaagcctttgcatcttccccggataaattagatgagttgtgcagccat
gggttggttactcaagctgcatctctcatttccacaagcaattctggcggtggtcaggga
tctttgagcataccaacatatacgggcttaatccggctgctttcaacatgtgcaagtggg
tctcctgttggagcaaaaactttacttatgcttgggatcagtggtatcctgaaagatata
ctggtaggttctgacatctctgctaactcagctgttccaccaacgttaagcagaccagct
gagcagatttttgagattgtcaatctggcaaaggagcttcttcctccattgcctcaagga
accatctccctccctgccagctctaatatatttttcaaaggatctattgtgaaggaggct
cctactagtagctctgagaaggaagacaacaccgatggaaatgcttctgaggtttcagcc
cgagagaaattgttgcataaacaacccgacattctccagcaatttggcatggacctactt
cctgttcttatacagatttatggttccagtgtcaatacccctattcgccacaaatgtctc
tcagttattggaaaacttatgtatttcagcagtgcagagatgattcagaatctattgagt
gtgacaaatttatcaagttttttggctggtattttagcatcgaaagatccacatgtcttg
gttccttcccttaagattgcagagatcctattggaaaagcttcctgcaacattctccaaa
atgtttgtccgagagggtgtggttcatgcagtggaccagcttgtattaattggtaatcaa
aataacactccttctctagcatcttatgttgagaaggataatgactctatatctggaatg
tcatcgcgttccaggcgttacagacgacgcagttataactcaaatcctgaaggcagttca
gtggaggagtctaagaatccagcatctttaaatattggttctcctcctagttcagtcgaa
acccctacaacaaatcttcgtactgttgtaagtggatgtgctaaagcattcaaagataag
tatttcccctctgagcctggtgctgttgaagttggtatgactgaagagcttctacactta
aaaaatctttgcatgaaattgaatgctggtgttgatgatcaaaagactaaggcaaaagga
aaatctaaagattctgggtctcaattggctgatatttctgctgccaaggaagaatatttg
attggggtgatctctgagattctagcagaactgagcaagggggatggtgtatccactttt
gagtttattggtagtgcttgtgttgcagccttgttaaactatttttcttgcggatacttc
tacaaggggataatttcagatggaaacctgcccaagcttcgccaccaagcccttaaaaga
tttaaattatttatcagtgttgcacttccttctagtgtggatgaaagaagtattgctcct
atggttgtcctggttcagaagcttcaaaatgctttatcatcagtagagcgtttccctgta
gttcttagccatgcctccaggtcatctggtgggagtgcacgcctctctttcggatttagt
gcattatctcagccttttaagttgcgtctttgtcgagcccatggagagaaatctcttcgt
gattattcatcaagtattgtgttgattgacccattagcaagtctagcaactgtagaagat
tttctttggcaacgagttcaacgaagtgatactgctcagaagctctccatttctgtagga
aattctgaatctgggaacacatctagtggggctgctacttcttctccatctaccacaact
cctgcttcggacactcgtcgtcatttttcaaggtccagatcatctgttagtataggagat
acagccacaaaggaaccatcatcacaggagaacagcacaagattgtcaaacggaaaaggt
aaggtagttttggagatggcacaagagaggttgagaggacctcagacaagaaatgctgct
ctgggtaaagatgatccaatgaaacctgtaaatggtgtctctacttctgaggatgaagaa
tcggacacatttcctgtggaggttgatgatgtttggggggttgaagatgatgatatttct
gatgatgaagaagatagtcatgaagatgtgctcagagatgattcttttcctgtttgcatg
ccagacaaagttcatgatgttaaattgggtgattcagctgaagatggcaagcctgcctca
gccattagagatagccaaataaatacagcttcaggatctagcagcagagcagctgctgtt
aagtgttcagactctgctgattttaggagtgcttatggctcaaagggtgctaagtcgttt
gcagctgctgccatggctgggctaggaagtgtaaatggtagaggtattaggggaggtaga
gatctggaagggcaacatccatttggtagttctaatgagcctccaaaattgacatttact
gctggtggtaagcagctcaaaaggcattttacaatctatcaggccatccagggacagctt
gtgttggatgaggatgaggatgatgaaagatgtgctgttagtgatatttctagtgaggga
agcagactgtggagtgacatctacacaataacgtatcagagggcagacggccaagctgac
cgatcatctgttgggggatcaggttctattacagaatcgaaatctaataaatctggttct
tccagctccaactctgttccccaaactcatagaatgtcacttttggattgcatcttgcaa
ggggaacttccttgtgatctagaaagatctaaccccacttataatatattggcactgttg
cgtgcgttagagggtttgaatcagcttgcgcatcgattaaggtttcagatattttccgac
aattttgctgaggggaaaatttcaaatctagatgagttaattctcactggttctagagtt
ccttctgaggaatttattaatggtaagctcactccaaaactggctaggcaaatgcaggat
gcccttgttctctgcagtggaaaccttccatcctggtgttaccagttgacagagtcatgc
ccctttttatttccttttgagacacgaaggcagtacttctattcaactgcctttgggttg
tctcgtgcattacatcgtcttcagcaacagcagagtgccgatggccatgggtcaactaat
gatagagaggtgagggttggtagattacagcgaaaaaaggttcgcatctcccgggaccgc
attttggattctgctgcaaaagtaatgaggatgtattctgtccaaaaagctgttctggaa
gttgaatactttggagaagttggaactggatcgggtcctactttggagttctacacactt
ttaagtcatgagttgcaaaagtttgaacttggaatgtggaggtcaaattctacatggaat
aagtcattaatggaaattgatggtgatgaaaagaaagaaggaaaaactgctggttccact
accattgatggagttatgattcaagctcctttagggttgttccctcgaccttggcagcta
aatgctgatgcttctgaaggtagtgaattttctaaaataattgagtatttccggctggtg
gggcgtgtgatggcaaaagctcttcaagatggacggcttttagacctgcccctatcaaca
tcattttataaacttgtgcttggtgaagagcttgatttgcatgatatcccgtcatttgac
tctgagtttgggaaaactttgctagaattacatcttcttgtttgtcgaaagaaatattta
gaattgatgggtgatgacagtggtgatgcaattgctgatttacgcttccgtggagcccca
atagaagacctttgtctggactttacacttcctggccatccagactacatattgaagcca
ggggatgaaactgtggatatcaacaacttggaggaatacatatctttggtggttgatgca
actgtcaagactggaattatgcggcaaatggaggcatttagagctggatttaatcaggtt
tttgatattgcttcgttacaaatatttaccccacaagagttggactatttgctgtgcggt
cgcagagagttgtgggaggctgagacacttgctgatcacataaaatttgatcatggatat
actgcaaagagcccagtgatcattaatttactcaaaattatgggagaatttacaccagat
cagcaacgggccttctgccaatttgttactggtgcccccagacttccacctggtggtctg
gcagtgctgaatcctaaactgaccattgttaaaaagcattcttctccctcggaatcagtt
gatgacgacttgcccagtgtcatgacttgtgctaattacttgaagcttcctccatattct
accaaggaaattttgtataaaaaattgctatatgcaatcagtgaagggcaagggtctttt
gatttatcatga
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integrated database retrieval system
