KEGG   Gossypium arboreum (tree cotton): 108480386
Entry
108480386         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108480386
  KO
K25861  DNA annealing helicase and endonuclease ZRANB3 [EC:5.6.2.- 3.1.-.-]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gab03032]
    108480386
   03400 DNA repair and recombination proteins [BR:gab03400]
    108480386
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    108480386
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    108480386
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HNH AAA_22 HNH_5
Other DBs
NCBI-GeneID: 108480386
NCBI-ProteinID: XP_017638859
LinkDB
Position
1:19418149..19434888
AA seq 1293 aa
MKLTEEERKQAEANRLAAIAKRKALLQSSSANIHCQENQSHYWRLAKCPKLANDNAQIPK
RPQDAKSMPVSSTQLSKKFQARLEICSPDTFSITPETLKGCLYPGDEECLRRLGDVLSDV
MHSHYTQDSGGRKACVYKLRDYGSVLSCLRKSKDIEIREIPHLTLKVVETFSHCFVAGQW
RPCRPEHLSDEDVDELITKLPETLLNSLLPFQLEGIKFGLRRGGRCLIADEMGLGKTLQA
IAIAGCFINEGSILVVCPAVLRYSWAEELERWLSFCLPSDIHLVFGHRDNPAYLNKYPRV
VVISYTMLKHLRKSMLEHEWAVIIVDESHHLRCSRKSTESAEIQTVLDLAEKVRRIVLLS
GTPSLSRPYDIFHQINILWPGLLGVTKYKFAETYCDVNFAQTTQGFKDFSKGVRLEELNV
LLSQTVMIRRLKQHVLVQLPPKRRQLIRLHLKKSDIASAKAAVSFSNADAFENNASNDIA
MEKLGGNNVNYGHFYGIHNCNSSELSYQELGVAKLRGFHQWFSNHPLIANSDGVEEFDLN
SSSHKMIIFAHHHKVLDGIQDFVCEKGISFVRIDGTTLPKDRQSAVLSFKSPNGAKIAII
GITAGGVGLDFSSAKHVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYILLAKDTLDELH
WQNLNKSLHRVSSTTNGKYDAMKEIEVEGISYMVTPDTNCKHKILVKETPGKLSLDLEQL
QDPACSQELQPSEAFADVAVEMNDGSDTMNQTGDSYNNSDVKGISDMVTPYANCKQKILM
KEAPGKLSLDLEQQQDPEYSQDLQPSEAFANVAVEMNDGSDTMNQTGDSYSHNDAGVVPD
RQLQDLNSMGNEKELHPSAADIGRCDVCPPFKMDNRSKDQEPLPNGKITTADVGAPVQPS
DAECNSIQVDSLRFEVSAHTGRIHLYSCIQGKDLRPVPLFENFRQEEIELENALACGSKE
TVSKYFKDNPAYRHVLWAFIDEWNNLRPIEQRKLRGKPLQLPLSVELCYLKESINHNTGG
LLKGGSKRRTTPFCEINVSLPPNAVWKKVHLQRSYSKKEKEYTQGWSLTDEPLCKLCQKP
CEGRNAKSPEYFEDLFCNLGCYEEYRLRTSSSFIREELFQLEHGICTNCQLDCHQLVKHL
KPLSLERQREYIARVAPKIASQKSLVDKLVSDPSEGNAWHADHIVPVYRGGGECRLENMR
TLCVACHAVVTAAQCIERRSIRTKAKKKLKAIMADLKKAENMEKNSSCGKDQGPSEIVED
IPEDELLVNVPGSAYSGGLNCSIQSELKNPPNT
NT seq 3882 nt   +upstreamnt  +downstreamnt
atgaagcttacagaagaagaaagaaagcaagcggaagctaaccggttagctgcgatcgca
aagcgaaaagcgctactacaatcctccagtgcaaacattcactgtcaagaaaaccaatct
cattattggaggctcgccaagtgccctaaactcgcaaacgacaatgcccagatcccaaaa
cgacctcaagatgcgaaatcgatgccagtttccagtacccaattgtctaaaaagttccag
gccaggctcgaaatttgctcccctgacactttctcgatcaccccggagacgctgaagggt
tgtctctacccgggcgatgaagagtgcttgcgaagattgggggatgttttatctgatgtt
atgcactcacattacacccaagacagtggaggtcgaaaggcatgtgtttataagctcagg
gattatggttctgttttgtcatgtttaaggaagtcaaaggatattgagatcagggagata
cctcatttaacactaaaagttgttgaaacattttcacattgctttgttgctggacaatgg
agaccgtgtagaccagaacatctatctgatgaggacgttgatgaattaatcacaaagcta
ccggaaacactattgaattcacttctgccttttcaacttgaaggtatcaaatttggtttg
cgaaggggtggtcggtgtctaattgcagatgaaatggggcttggcaaaacactccaggct
attgctattgctggttgtttcattaatgaaggttctattctcgttgtttgccctgctgtt
ttgcgttattcatgggcagaagaattggagcggtggctatccttttgtttaccttctgat
atacatcttgtttttggtcatcgggataatcctgcctacttaaacaaatatcctagagtt
gtggttatttcttacactatgcttaaacacttgcggaagagcatgcttgaacatgaatgg
gctgtaataatagttgatgaatctcaccatcttcgatgttcacgaaaatcaactgaatca
gcagagatacaaacagttcttgatttggcggagaaggtcaggcgtatagtactcttatca
ggaacaccttctttgtcaaggccatatgacatttttcatcagataaatattttgtggcct
ggtttgttgggagtgaccaagtacaagtttgcagaaacttactgtgatgtcaactttgct
cagaccactcaaggttttaaggatttctcaaagggtgttcgcttggaggagttgaatgtg
ttacttagccaaacagtcatgataagacgtctgaagcagcatgtcctggtccagttacct
cccaaacgtcggcagcttataaggttgcatttgaagaaatccgacatagcttcagccaag
gcggctgtcagtttttccaatgctgatgcttttgaaaataatgcttccaacgatattgct
atggagaaactgggtggaaacaatgttaattatggacatttctatggcattcacaattgc
aattctagtgaactttcttatcaagaacttggtgttgcaaagcttcgtggatttcatcaa
tggttttctaatcacccactaattgcaaattcagatggcgtggaagaatttgatttaaac
tccagttctcataaaatgataatttttgcccatcaccataaagttcttgatggaatacag
gacttcgtatgtgagaaaggaattagttttgtccgtattgatggaaccacacttccaaaa
gatcgacaatcagctgtactgtcatttaaatcaccaaatggggccaaaatcgcaataatt
ggaataactgctgggggtgttggactcgatttttcatcagcaaaacatgttgtgtttttg
gagttgcctcagtcaccatctttgatgcttcaggctgaggatagagctcatagacgaggg
caaacaagcgcggtcaacatttacatcctcttggcaaaggatactttggatgagttacat
tggcaaaatctaaacaagagtctgcaccgtgtttcatctacaacaaatggaaaatatgac
gcaatgaaagagatagaagttgaaggcatttcttatatggttacacctgatacaaattgc
aaacataaaattttggtgaaagaaacacctggaaaactttcattagatttagagcagctg
caagaccctgcatgttcccaggaattgcagccttcagaagcatttgctgatgttgctgtt
gaaatgaatgatggatctgacacaatgaatcaaactggtgacagctacaataacagtgat
gttaaaggcatttctgatatggtaacaccttatgcaaattgtaagcaaaaaattttgatg
aaagaagcacctggaaaactttcactggatttagagcagcagcaagaccctgaatattcc
caggatttgcagccttcagaagcatttgctaatgttgctgttgaaatgaatgacggatct
gacacaatgaatcaaactggtgacagctacagtcataatgatgctggtgtggttcctgat
cgacaactccaagatcttaattccatgggaaatgaaaaagaattgcatccttctgcagct
gatattggaagatgtgacgtatgccctccttttaaaatggataacagaagcaaagatcaa
gagccactgccaaatggaaagataaccacagcagatgttggtgcaccagttcaaccatca
gacgctgaatgtaattctattcaagttgattctctacggtttgaggtaagtgcccatact
ggaagaatccacctgtattcctgcatccaagggaaagatttgagacctgtgccacttttt
gagaattttcgacaagaggaaattgagttagaaaatgctcttgcttgtgggagtaaggaa
acagtttccaaatatttcaaggacaaccccgcatataggcatgttctttgggccttcatt
gatgaatggaataatctaagacccattgaacaaagaaaactacgtggaaagcctttgcaa
ctccctttgtctgttgagttatgctacttgaaggaaagcattaaccataatactggggga
ctgctaaaaggtgggagcaagcgccgcacaacacctttttgtgagataaatgtttctttg
cctccaaatgctgtgtggaaaaaggtccatctacagcgtagttacagtaaaaaggagaaa
gagtatactcagggttggtcgctgactgatgaaccactctgtaaactctgccaaaaacca
tgcgaggggagaaatgccaagagtcccgaatattttgaggatcttttttgtaatcttggc
tgctatgaagaataccgcctaagaactagcagcagtttcatccgtgaggaactttttcaa
cttgagcacggtatctgcacaaattgccaattagactgtcaccaacttgtgaagcactta
aaacctttatcgttagagaggcagcgggagtatattgcaagagtagcaccaaagattgca
agtcagaagagcttggttgacaagcttgttagtgatccttccgagggcaatgcatggcat
gcagaccacattgtccctgtttatagaggtggaggtgaatgcaggctagagaacatgagg
actctttgtgtggcctgtcatgctgttgttactgcagcacaatgcattgaacgtcgttca
attcggaccaaagcaaagaaaaagcttaaagccatcatggctgacctcaaaaaagctgag
aatatggaaaagaattcttcttgtggaaaggatcagggaccctcagagattgttgaggac
ataccagaggatgaacttctagtcaatgtacctggtagtgcttattctggaggactaaac
tgcagcattcaatctgagttgaagaatcccccaaacacttaa

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