Gossypium arboreum (tree cotton): 108480511
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Entry
108480511 CDS
T05776
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108480511
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108480511
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108480511
NCBI-ProteinID:
XP_017639023
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Position
1:complement(16520719..16522475)
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AA seq
411 aa
AA seq
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MARTMAMAIPSLPLLFLFTFLLLLPLLISSSPVQDPELVVQDVHRAINASRRNLGYLSCG
TGNPIDDCWRCDPNWETNRQKLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTL
RHAVIQDEPLWIIFARDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITVQYVTNIIIH
GLNIHDCKQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCKDGLIDAIH
GSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHV
VNNDYTHWEMYAIGGSANPTINSQGNRFTAPNNRFSKEVTKHEDAPESEWKSWNWRSEGD
LMVNGAFFIASGAGASSSYAKASSLGARPSSLVATITTNAGALNCKKGSHC
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggacaatggcaatggcgatcccttcacttcctcttctcttcctctttacattt
ctgcttctactcccacttctcatttcctcttcccctgttcaagaccctgagcttgtagtc
caagatgttcacagggccatcaatgcgtccaggaggaacctagggtatctctcctgtgga
accggcaaccccattgatgactgctggagatgtgaccccaactgggagactaatcgccag
aagctagctgattgtgccattgggttcggcaagaacgccattggcggaagagatggtaag
atttatgtggtcactgactcgggcgatgatgaccccgttaaccccaaaccagggacatta
cggcatgcggtgattcaagacgaaccgttgtggatcatttttgctcgtgacatgaccatt
cagctaaaagaagagctgataatgaactcattcaagaccatcgacggtaggggcgccagc
gttcatattgcagggggtccatgcattaccgttcagtatgtgaccaacattatcattcat
ggactcaacatacatgattgtaaacaaggagggaatgctatggtgagggactccccacgt
cactatggttggaggaccatatcagacggtgatggtgtgtccatcttcggtggtagccat
gtttgggttgaccataactccttatcaaactgcaaagacggcttgattgacgctatccat
ggctccaccgctatcaccatttccaacaattacatgactcaccatgataaagtcatgtta
ttgggacacagtgattcgtatactcaagacaagaacatgcaagtcactattgcctttaat
cactttggtgaaggccttgtccaaagaatgccacgatgtagacatgggtatttccacgtg
gtgaacaatgactatactcattgggaaatgtatgccattggaggaagtgctaacccaaca
ataaacagccaagggaatagatttactgcacctaacaacagattcagcaaagaggtgacc
aaacatgaggatgcaccggagagtgaatggaagagctggaattggagatcggaaggtgac
ctaatggtaaacggtgcattctttatcgcgtcgggtgctggcgcctcgtcgagctatgcc
aaggcttcaagcttgggtgctaggccatcttcactagtggcaacgataacgaccaatgct
ggtgcgcttaattgcaaaaaaggttcacattgttga
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