Gossypium arboreum (tree cotton): 108480576
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Entry
108480576 CDS
T05776
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03030
DNA replication
gab03410
Base excision repair
gab03420
Nucleotide excision repair
gab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108480576
03410 Base excision repair
108480576
03420 Nucleotide excision repair
108480576
03430 Mismatch repair
108480576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108480576
03036 Chromosome and associated proteins [BR:
gab03036
]
108480576
03400 DNA repair and recombination proteins [BR:
gab03400
]
108480576
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108480576
DNA Replication Termination Factors
ELG1-RFC complex
108480576
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108480576
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108480576
Check point factors
HRAD17(Rad24)-RFC complex
108480576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
Rad17
AAA_16
Viral_helicase1
AAA_28
AAA_19
AAA_11
nSTAND3
RCF1-5-like_lid
AAA_5
RuvB_N
AAA_24
AAA_assoc_2
DNAX_ATPase_lid
bpMoxR
AAA_25
IstB_IS21
AAA_30
ABC_tran
RNA_helicase
MeaB
AAA_3
AAA_18
NTPase_1
cobW
AAA_7
T2SSE
AAA_29
Motif
Other DBs
NCBI-GeneID:
108480576
NCBI-ProteinID:
XP_017639102
UniProt:
A0A0B0MTS1
LinkDB
All DBs
Position
1:complement(3189502..3192733)
Genome browser
AA seq
332 aa
AA seq
DB search
MTSSSSSTAGGYDVPWVEKYRPSKVSDIVGNEDAVSRLQVIALDGNMPNLILSGPPGTGK
TTSILALAHELLGPVYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIIILDE
ADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILGRL
MVVVDAEQVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHPLH
VKNMVRNVLEGKFDDACFALKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGF
AHMRICDGVGSYLQLCGLLAKFSRVCETAKAT
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcctcttcatcgtccaccgccggcggttacgacgtgccttgggtagaaaaatac
aggccgagcaaagtctcggacatcgtcggcaacgaagatgccgtgtctcgactccaagtc
attgctctcgacggcaacatgcccaatctcatcttatccggtcctcctggaactggtaaa
acaactagtattttggctcttgcacatgagcttttggggccagtctataaggaggctgtt
ttggagcttaatgcatcagatgacaggggtatagatgtcgttcggaacaagattaagatg
tttgctcaaaagaaagtaactttacctcctggacggcacaagataattattttggatgaa
gctgacagcatgacatctggtgcacaacaagccttgaggaggacgatggaaatatactca
aactctactcgatttgctcttgcttgcaatacatcatcaaaaatcattgaacctattcag
agtagatgtgcccttgttcgattttcaaggttatctgatcaggagattctaggccgtcta
atggtggtagtagatgcagagcaggtaccgtatgttccggaaggtcttgaagctatcatt
ttcacagctgatggtgatatgagacaggcgttgaacaacttgcaggctacatacagtgga
ttccgttttgtcaatcaagaaaatgttttcaaggtttgtgaccagcctcatccattgcat
gtgaaaaatatggtccgcaatgtacttgaagggaaatttgatgatgcttgtttcgctctg
aagcaactctacgatttgggctattctcctactgatataatcactacccttttcagaata
ataaaaaattatgatatggccgagtacttaaaactggaattcatgaaggaaactgggttt
gctcatatgaggatctgtgatggagttggttcatatcttcagttgtgcggtcttctggca
aagttttctcgagtttgcgaaactgctaaagcaacataa
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integrated database retrieval system