Gossypium arboreum (tree cotton): 108480752
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Entry
108480752 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108480752
KO
K12586
exosome complex component RRP43
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108480752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108480752
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108480752
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108480752
NCBI-ProteinID:
XP_017639334
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All DBs
Position
1:122761373..122766510
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AA seq
300 aa
AA seq
DB search
MGLPNASGDLSTEVEVDAFRRLFPLRFYEKHLLESIRPDARPLGRARETTIALGAVASAN
GSALAKIGSTTMLAAIKMEVMTPSLETPDEGCIAIDFHMPPICSPIVRPGRPAEGAPVVA
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDTALLSAVAAFSHLEIP
VVSLNDDGKIVLSEEQGLSDREPVNKEKRKINLSSVPFSLTCVLHKNYILADPTAEEESI
MDTIVTVVLDSSSQLVSLHKPGGTVLAYTSAIQDCIALTRQRVKELQKILEEGISGMEVD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgggattaccaaatgcgagcggtgacttgtcaactgaagttgaggtagatgctttcaga
cgcctctttccccttcgtttctacgagaaacatcttttagagtctatacgtcctgatgct
cgtccgcttggaagagcaagagaaaccaccattgcccttggggctgttgcatctgctaat
ggttcagcacttgcaaaaattggttcaactactatgttggctgctatcaaaatggaggtc
atgaccccttcattggaaacaccggatgagggttgtatagcgattgatttccacatgcct
ccaatttgttctccaattgttaggcctggcagaccggctgagggagcaccagtcgtggca
aagcaattgtcagacactattttaagctctggcatgatcaatttgaaggaactgtccttg
gttagtggaaaagctgcttggatggcatatttggacatatactgtttggatgctgatggt
gctctttttgacactgcattactctcagctgttgctgccttttctcatttggaaatccca
gtggtatctctcaacgatgatggaaagatcgttttatcagaggaacaaggactatctgac
agggaaccagtcaataaggagaaaagaaaaattaatctgagcagcgttccgttttcattg
acatgtgtacttcacaagaactacattttggcagatcctactgccgaggaagaatctatt
atggacacaattgtaaccgtggttttagattcatctagtcaactcgtctcgcttcataaa
ccaggtggaacagttctagcatatacatcagctatccaggactgtattgcattaacacgg
caaagagtgaaggaacttcaaaagattctagaggaaggcatttctggtatggaggttgac
taa
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