Gossypium arboreum (tree cotton): 108480870
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Entry
108480870 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108480870
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108480870
Membrane trafficking [BR:
gab04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108480870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
108480870
NCBI-ProteinID:
XP_017639488
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All DBs
Position
1:117021748..117025803
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AA seq
519 aa
AA seq
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MEGLIKYPQIEPEDNQFQFFSSQDLEKVEESREKCTLVNTDVMQDGKQLKRSESQVHPRV
SGCNSMEILSSDGNQKKGEAFYYDTPFSEETGIWVPVSVPPVSENKHEEWDRGLCLNGGY
FPDDGVRSNQFIEESKDLTMWDVLSEMLIAARGKVSSIASGDVQRYGITWFSSHLLEQTW
KEMAQTLAEANFGNINEILEAEPPKWLADSAASNCMLCNVRFHPIMRSRHHCRFCGGIFC
NECSKGRSLLPMKFHMGNPQRVCDVCCVRLEPVQPYLMDHISRAAQLPTHDLTDLSTLRS
WLNFPWGQSMEYEIYKAANTISNYSKVGSLKPEKSIPDAILRQAKGLAILTVAKVGVMVT
YNIGTGLVVARRDDGSWSPPSAIASCGVGWGVQAGGEFTDFIIVLRKESAVATFSGNMHL
SVGAGLSAAAGIVGRAAEADIRGGSGGYAACYTYSCSKGAFLGCSLEGSVVTTRNQENSR
FYGNPSITASDILLGSLPMPPAASTLYQALSNLFAKLER
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaggggctgataaaataccctcaaatagaaccagaagacaaccagtttcaattcttc
tcttcccaggatctggaaaaagtggaggaaagtagagaaaaatgtactcttgtaaatacc
gatgttatgcaagatggaaagcagcttaaaagatctgaaagtcaagtgcatcctagagtt
agtggatgcaatagtatggaaattctttccagcgatggaaatcagaaaaaaggagaagct
ttttactatgataccccattttctgaagaaactggaatttgggtacctgtgtctgtccct
cctgtgtctgaaaataaacatgaagaatgggatagaggcctatgtctgaatggaggatac
tttcctgatgatggtgtgcgatcaaatcagtttattgaagaaagtaaggatctgaccatg
tgggatgtgctcagtgagatgttaatagccgctcgaggcaaagtgagttctatagcttca
ggtgatgttcaaagatatgggatcacttggttttccagccatcttcttgaacaaacttgg
aaagagatggctcaaacgcttgcagaagctaattttggtaacatcaatgaaattcttgaa
gcagagccaccaaagtggttggctgacagtgctgcttctaattgcatgttatgtaatgtg
cggttccatcctataatgcgctcccgtcatcattgccgattctgtggtgggatattctgc
aatgaatgttctaaagggcggagcttgttaccaatgaaattccacatggggaacccacaa
cgagtatgtgatgtttgttgcgtgaggcttgagcccgtccaaccatacttgatggaccac
attagtcgtgctgctcagttgcctacccatgatctgacagacctcagtacgttaagatca
tggctgaatttcccttggggccaatccatggaatatgagatttataaggctgcaaatacc
attagcaattatagtaaggttggatccttgaaacctgaaaagtccatacctgatgctatt
ttaagacaagcaaaagggcttgcaattcttactgttgcaaaggtcggggttatggtgact
tacaatattggaacagggcttgttgttgctcgtagagatgatggatcatggtctccacca
tctgcaatagcttcctgtggtgttggctggggagttcaggctggtggtgaatttacggat
ttcattattgtattgagaaaagaaagtgctgttgcaacatttagtggaaacatgcattta
tcggttggagcagggttgagtgcagctgctggcattgttgggcgagctgctgaagctgac
atacgtgggggctctggaggttatgctgcttgttatacatacagctgtagtaaaggtgca
tttttggggtgctcacttgaaggaagtgtagtgacaaccagaaaccaagaaaattctaga
ttttatggtaatccatctatcactgcttcagatattcttctcggttcactgcctatgcct
cctgctgcttccactctttatcaagctctctcaaatctatttgcaaagctcgagagatga
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