Gossypium arboreum (tree cotton): 108480981
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Entry
108480981 CDS
T05776
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108480981
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
108480981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
AAA_14
nSTAND3
Viral_helicase1
ATPase_2
Cytidylate_kin
NPHP3_N
TIP49
ABC_tran
AAA_2
AAA_5
AAA_28
NACHT
DUF815
RNA_helicase
AAA_30
TsaE
AAA_11
RuvB_N
AAA_33
AAA_24
KAP_NTPase
AAA_17
AAA_7
Rad17
SLFN-g3_helicase
nSTAND1
bpMoxR
PduV-EutP
IstB_IS21
AAA_19
NB-ARC
Aldo_ket_red
AAA_3
Cytidylate_kin2
Mg_chelatase
SRPRB
ResIII
nSTAND6
NTPase_1
AAA_13
CPT
Motif
Other DBs
NCBI-GeneID:
108480981
NCBI-ProteinID:
XP_017639629
UniProt:
A0ABR0R5P1
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Position
1:13829385..13836264
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AA seq
457 aa
AA seq
DB search
MSSPMDISVPNLEGVKISDQNGVPLASSPASPSNGPHEKFHVSVEVCLKPSSTARPDDVR
KAVEQMLEKRSLSYVDGPIPVPNDDPFLMENVHRIRICDTDEWVKNHDILLFWQVKPIVH
VFQLSEEGPCEELTGDGQLSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFT
EKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSSRYPQCQLIEVNAHSLFSK
WFSESGKLVAKLFQKIQEMIEEENNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNAL
LTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELIR
KGIISNIQGSSQYILSDYVTLKEKLKMHEIHEVQTTFHLCKQLAEAAEACEGLSGRTLRK
LPFLAHAALDNPYCCDPNKLLNTMIDTARREHSELPD
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccaatggatatttccgttccaaacctcgagggcgtcaagatctccgaccaa
aacggcgtccctttagcatcatccccggcatcgccttctaacgggcctcatgaaaaattt
cacgtttctgttgaagtttgcttaaaaccttcaagcacagctcgccctgacgatgtccga
aaagccgttgaacaaatgcttgaaaagagaagcctgagctacgttgatggtcccattcct
gtgcctaatgatgatccatttctcatggaaaatgtacacagaatccgtatatgtgataca
gatgaatgggtgaaaaaccatgatattcttttgttctggcaagtgaaacccattgttcat
gtctttcagcttagtgaggagggaccatgtgaggaattgactggggatggccagttgtcc
agcttcaatgaatggatcctaccagctaaggaatttgacggcatgtgggagagcttaata
tatgaatctggcctaaagcagcggttattgcgttatgcagccagtgcattgctttttact
gaaaaaggtgttgatcctttccttgtgtcatggaaccgcattattcttttacatggtccc
ccagggaccggaaagacatctctatgtaaagcgctggcacaaaagctatccattagattc
agctccagatatccacaatgccaattgattgaagttaatgcacattctttgtttagtaaa
tggttctctgagagtggcaaattggttgcaaagcttttccaaaaaattcaagaaatgata
gaagaagaaaacaatctagtatttgttctaattgatgaagttgaaagtcttgctgctgct
agaaaggctgctttgtctggttctgagccttcagattccattcgggttgtaaacgcgcta
ttgactcagatggataagctgaaatcatctcccaatgttataattttgaccacatccaat
ataactgctgctattgatatcgcttttgttgaccgagctgatatcaaagcatatgtgggc
cctccaactcttcaagctcgttatgaaattttaagatcctgcttgcaggaacttattcgg
aaaggaataatatcaaatatccagggttcaagccaatacatcctttcagactatgttact
ttgaaagagaaattgaaaatgcatgagattcatgaagttcaaacaacatttcatctgtgt
aagcaattagcagaggctgctgaagcatgtgagggattgagtggaagaacattaagaaaa
ctaccatttttggcgcatgcagcacttgacaacccgtattgttgtgaccctaacaagttg
ttgaacacaatgattgacacagcccggagggagcattctgaactgcccgactga
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