Gossypium arboreum (tree cotton): 108481026
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Entry
108481026 CDS
T05776
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108481026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108481026
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108481026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
CcdA
Motif
Other DBs
NCBI-GeneID:
108481026
NCBI-ProteinID:
XP_052876436
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All DBs
Position
10:85000467..85004244
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AA seq
269 aa
AA seq
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MESSSMATARHTCLKLEIPSTDPLFVKGTWFDTHFHLSVTDGLRAWLCNATEEEVQERAA
QWDQPVAEYIELAERYLGFQQPGSVYQFVDAGDDHKRLSWTFEREGTKLEWRWKFQPSND
SRKITAGILDFLMDANINLSMLIRRILQEEVVRKTQSFEKLKLEAEKCLEQSERFTNEKM
EFESEIYAKFLGVLNSKKAKLRELRDQLSKQEIAGKASVDEEESTDKTESYHSGSNAEES
EEEADKKITSSSKDIPAGRGRGRKRATRK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagctctatggcaacggcaagacatacttgccttaagcttgaaattccaagc
accgatcctctcttcgtgaaaggcacgtggttcgatactcacttccatctctccgtcacc
gatggcctccgcgcttggctctgcaacgcgacggaggaggaggtgcaggaaagagcggct
cagtgggatcagcccgtcgctgaatacattgaattagccgaacggtatttagggtttcaa
cagcccggttcagtctaccagttcgttgatgctggcgatgatcacaaaagactttcatgg
actttcgaaagagaaggaactaaacttgaatggcgatggaaattccagccgtcgaatgat
agccgaaagattacagcgggcattttggattttcttatggatgcaaacattaacctaagc
atgctgataagaagaattttacaggaagaagtggttagaaaaactcaatcttttgagaag
ctcaaactggaagctgagaaatgtttagaacaaagtgagagatttaccaatgagaagatg
gaatttgaatcagaaatctatgcaaagttccttggggtcttgaattcaaagaaggcaaaa
ctcagggagcttcgagaccagctctcaaaacaggaaattgcaggaaaagcttcggtggat
gaggaagaatctactgataaaacagagagctaccatagtggaagtaatgctgaggaaagt
gaagaagaagctgacaagaaaatcacaagcagttcaaaggatattccagcaggcagaggt
cgtggtcgaaagagagctacacgtaagtaa
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