KEGG   Gossypium arboreum (tree cotton): 108481621
Entry
108481621         CDS       T05776                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03083  Polycomb repressive complex
gab04120  Ubiquitin mediated proteolysis
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108481621
   04120 Ubiquitin mediated proteolysis
    108481621
  09126 Chromosome
   03083 Polycomb repressive complex
    108481621
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108481621
   04121 Ubiquitin system [BR:gab04121]
    108481621
   03036 Chromosome and associated proteins [BR:gab03036]
    108481621
Membrane trafficking [BR:gab04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    108481621
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     108481621
   Cul7 complex
     108481621
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108481621
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     108481621
SSDB
Motif
Pfam: Skp1 Skp1_POZ ERAP1_C HFX_2341_N DUF2277 NTS Sigma70_r1_2
Other DBs
NCBI-GeneID: 108481621
NCBI-ProteinID: XP_052874834
LinkDB
Position
1:103858049..103858805
AA seq 171 aa
MSVMATETNKITLLTADEEEFVVDEAIAMEFGTVKTYYEDNPDSCDEAIPLPNVTSKYLA
KVIEYYKWHVEHRARKAPKPEEDEEAKAFDEALFNTLDNEGMKQMIMAANYLDAKDLLEM
LTQAVADRIKNKSVEYVRKVFGIENDYTPEEEAELRKQNEWAFEDLDPDDN
NT seq 516 nt   +upstreamnt  +downstreamnt
atgtcagttatggcgacggagacgaataaaatcacccttctaacggcggatgaagaggaa
ttcgtagtggatgaagccatagcgatggagttcggcacggtgaagacgtactacgaggac
aatccagactcgtgcgatgaagccattccactccccaacgtgacatccaaatacttggca
aaagtgatcgaatactacaagtggcatgtagagcatcgagctaggaaagcaccgaaaccg
gaggaagacgaggaagcgaaggcgtttgatgaagcgctgttcaatacgctggacaacgag
ggaatgaaacagatgataatggcggctaactatctggatgcaaaagatctgcttgaaatg
ctgacgcaagcagtggcggataggataaaaaataagagtgtggaatatgttaggaaggtt
ttcgggatcgagaacgattatacgccagaggaagaggctgagcttaggaaacagaatgaa
tgggctttcgaagatttggatcccgacgataattga

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