KEGG T05776: 108481793

Gossypium arboreum (tree cotton): 108481793

Entry

108481793         CDS       T05776

Name

(RefSeq) E3 ubiquitin-protein ligase RDUF1-like

K11982

E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]

Organism

gab Gossypium arboreum (tree cotton)

Brite

KEGG Orthology (KO) [BR:gab00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108481793
   04121 Ubiquitin system [BR:gab04121]
    108481793
Enzymes [BR:gab01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108481793
Membrane trafficking [BR:gab04131]
Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    108481793
Ubiquitin system [BR:gab04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108481793

SSDB

Motif

Pfam:

DUF1117 Zn_ribbon_19 zf-RING_2 zf-C3HC4_2 zf-RING_11 zf-rbx1 zf-C3HC4 zf-RING_UBOX zf-ANAPC11 zf-RING_5 zf-C3HC4_3 zf-C3H2C3 Rad50_zn_hook zf-RING-like

Other DBs

NCBI-GeneID:

108481793

NCBI-ProteinID:

XP_017640362

LinkDB

Position

1:complement(9061748..9063100)

AA seq 364 aa
MSSTSSYWCYSCTRLVRVVVLDSGSNDAVVCPYCDGGFIEEIESSDNHNRRFPAMYMITS
NDNSRQNSNRARNLVFRRNRRGSVDRSNINPIIVLRGSTDDENGSTNGISNSGFGFFYDD
GSGSGLRPIPTSMSESLMGLGFDRLLEQLSQIEITGLGQPENPPASKSAIESMPTIQIEK
AHVCSETHCAVCKEPFELGSEAREMPCKHIYHEDCIIPWLALRNSCPLCRHELPSDRSES
NDEASETVGLSIWRLPGGVFAVGRFRGEREVPVVYTEMDGGFGESGSESGSGHGAARRVS
WVGVRRRENGFRRVVRNVTSFLRGLRSQPSHRGNEESGGLTRSGSTSMFRRFTRSLSSSS
NSVL

NT seq 1095 nt +upstreamnt +downstreamnt
atgtcttcaacgtcttcgtattggtgttacagctgcacccgtctggttcgtgtggtggtt
ttggatagcgggtcaaacgacgcggttgtctgcccgtactgcgacggaggcttcatcgag
gagatcgaatcttcggacaatcacaaccgtcggtttccagctatgtacatgatcaccagc
aacgataatagccgtcaaaattcgaatcgggcgcgaaatctcgtctttcgtaggaatcgt
cgcggttctgttgaccggtcaaacatcaatccgatcatcgtcctccgtggctccaccgac
gacgagaacggctccaccaacgggatcagcaacagcgggtttgggttcttctatgatgac
ggatctgggtccggtttaagacccataccgacttcgatgtccgaatctctaatgggtttg
ggtttcgaccggttattggaacagctttcccagatcgaaataaccggactgggtcaaccc
gagaacccgccggcttcgaaatcggcaatcgaatcaatgccgacgattcaaatagaaaaa
gcccatgtttgttcggaaacccactgcgccgtttgtaaagaacctttcgagctcgggtcg
gaagcgagggagatgccgtgcaagcatatttaccatgaagattgtatcatcccatggctg
gcgcttcggaactcgtgcccactttgccgccacgaattgccgtcggatcggagcgagtcg
aacgacgaggcatcagagacggtggggctgagcatatggaggttaccgggtggggttttc
gcggtgggaaggttcaggggagaaagggaagtgccggtagtatacacggagatggacggt
gggtttggggaatcgggatcggaatcgggttcgggtcatggagcagcgaggagggtatcg
tgggtcggggtaagaagaagagagaatggattcaggagagttgttagaaatgtgacgtcg
tttttgagggggttgaggtctcagccgtctcatcgtggaaatgaagaatccggtggtttg
actagaagtggttcaacgtctatgtttcgtaggtttacaagaagcttaagctcaagctcc
aactctgttttgtaa

DBGET integrated database retrieval system