KEGG   Gossypium arboreum (tree cotton): 108481829
Entry
108481829         CDS       T05776                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108481829
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108481829
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 108481829
NCBI-ProteinID: XP_052880837
LinkDB
Position
1:115473773..115476029
AA seq 454 aa
MEVTKVRFAFFFSFAALIPGLWANIAEFDDFWKQREEEAWNITLATYERNPENVTNNLSY
NVNKFLKETSANQTIDFEDGITNNTRRYLRGKHKKYTGPCMATNPIDRCWRCKKNWAKNR
KRLAKCVLGFGHRTHGGSKGKYYLVTDNSDHDVLNPKLGTLRHAVIQKRPLWIIFARTMH
IKLSQELIVQSHKTIDGRGADVHIAYGAGITLQFVHNVIIHNIHIHRIVPSSGGLIRDSE
DHFGYRTVGDGDGISIFGSSNIWLDHISMSECHDGLIDAIQGSTAITVSNCHFTHHDAVM
LLGASDSYSKDKFMQVTIAFNRFGKELLQRMPRCRWGFFHVVNNDYTHWKMYAIGGSMHP
TIISQGNRFIAPHDPNAKEVTNRLYASESEWKNWIWRSERDVLLNGATFRTSGPLSPPHL
KFNRKEMIKAKPGAYVRRLTRFAGTLNCRKRIKC
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaggtaactaaagtgaggtttgcttttttcttttcgtttgccgcactaattccagga
ttatgggcaaatattgctgaatttgatgacttttggaagcaacgtgaggaagaagcatgg
aatattaccttggcaacttatgagcgaaacccagaaaacgtcaccaataatttgagctat
aacgttaacaagtttcttaaagaaactagtgccaaccaaaccatagattttgaggatggt
attactaacaacacaagaagatacttgagaggaaaacacaagaagtacactggtccgtgc
atggcgaccaatccaattgataggtgttggcggtgtaagaagaactgggccaaaaatcgt
aaaagattggcaaaatgtgtgcttggttttggccatagaactcatggtggaagtaagggg
aagtattatttggtgacagataattctgatcatgatgttctaaacccaaaactaggaacc
ttacgtcatgctgtgatccaaaaaaggccattatggatcatttttgctcgtaccatgcac
atcaaattgtcacaagagctaatagttcaaagtcataagacaatcgatggccgtggagca
gatgttcatatagcatatggagctggaattacacttcaatttgtgcacaatgtcatcatt
cacaacattcatatccatcgcattgttccaagttccggtggcctaatcagggactctgaa
gatcactttggttacagaacagtaggtgatggagatggaatttccatatttggatcatca
aatatttggcttgatcacatttctatgtctgagtgccatgatgggcttattgatgcaatc
cagggttcaactgccatcaccgtttcaaattgccatttcacccatcacgatgctgtgatg
ttgttaggagcaagtgatagctattctaaagataaattcatgcaagtgacaatagcattc
aaccgttttggcaaggaattattacaaagaatgcctagatgtcgatggggtttctttcat
gttgttaacaatgactacacacattggaaaatgtatgctattggtggtagcatgcatccc
accattatcagccaaggtaacaggttcattgctccgcatgaccccaatgccaaagaggta
accaataggctctatgcatcagagtcagaatggaaaaattggatatggagatcagaaaga
gacgtactccttaatggagccacctttagaacttctgggccactctcgccaccccatttg
aaattcaacagaaaggaaatgatcaaagccaaacctggagcatatgtcagaagactcact
cgtttcgcggggactcttaactgtagaaaaagaatcaaatgttag

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