Gossypium arboreum (tree cotton): 108481979
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Entry
108481979 CDS
T05776
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22 isoform X1
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108481979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108481979
03110 Chaperones and folding catalysts [BR:
gab03110
]
108481979
Enzymes [BR:
gab01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108481979
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108481979
Chaperones and folding catalysts [BR:
gab03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108481979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
108481979
NCBI-ProteinID:
XP_017640571
LinkDB
All DBs
Position
10:116569797..116572290
Genome browser
AA seq
191 aa
AA seq
DB search
MASGGGSSGGGVEWHVRPPNPKNPIVFFDITIGSIPAGRIKMELFADIAPKTAENFRQLC
TGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFLKGDGSGCTSIYGHKFEDENFIAKHTGP
GLLSMANSGPNTNGCQFFITCAKCEWLDNKHVVFGRVLGDCLLVVRKIENVATGPNNRPK
LPCIIAECGEM
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggaggaggaagcagcggtggaggtgtggagtggcacgttaggcctccgaat
cccaaaaatccaatcgtctttttcgatataaccatcggttccatccccgccggccgtatc
aaaatggaactcttcgctgatattgctcctaaaactgccgaaaatttcagacagctatgc
accggcgaatacaggaaagcagggctgcctgttggttacaagggttgccaatttcatagg
gttattaaagattttatgattcaagctggagattttcttaagggtgatggtagtggatgt
acttccatatatggccataagtttgaagatgaaaatttcattgccaagcacactggtcct
gggcttctatcaatggcaaacagtggtccaaataccaatggttgtcagttttttatcacg
tgcgcgaaatgtgagtggcttgataataagcatgttgtattcgggagggtacttggagat
tgtcttctcgttgttcggaagatcgagaatgtggctacaggaccaaacaaccggccgaaa
ttaccatgcattatagctgagtgtggggaaatgtaa
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