Gossypium arboreum (tree cotton): 108482293
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Entry
108482293 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108482293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108482293
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108482293
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108482293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-Di19
YpzI
Motif
Other DBs
NCBI-GeneID:
108482293
NCBI-ProteinID:
XP_017640906
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All DBs
Position
1:complement(70717545..70720383)
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AA seq
306 aa
AA seq
DB search
MAPGGSACKEVESYPAVADYAIATTTPESNSMTTKSSFGFVGKHGIQSNNGVYELLECPV
CKNLMYPPIHQCPNGHTLCLNCKNRVRNCCPSCRYDLGNIRFLALEKFAESLELPCKYHS
LGCHEILPYYSKLKHKQHCRFRPYNCPYAGSDCSITGDIPTLIAHLKDDHKVDMHDGCTF
NHRYVKSNPQEVEHATWMLTVFKCFGKQFCLHFEAFQIGMVPVYMAFLRFMGDDSEAKKF
GYCLEVGANGRKLTWQGIPRSIRDGHRKVRDSQDGLVIQRNLALHFSGGDRQELKLRVSG
RIWKEA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctcctggaggcagtgcttgcaaagaagttgaatcttatcctgccgttgcagattac
gccattgctacaacaacacccgagagtaattctatgacgacaaaaagttcttttggtttt
gttggaaaacatggaattcagtcaaacaatggtgtttatgagctccttgaatgtcctgta
tgcaaaaacttgatgtacccgccaattcaccagtgcccaaatggacacactttgtgtttg
aattgcaagaatagagtgcgtaactgttgtccgtcatgccggtatgatctcggaaatata
aggtttttagctttggagaaatttgcggaatccttggaactcccttgtaaatatcatagc
ctaggttgccatgaaattctcccatattacagcaagcttaagcacaagcaacactgtcga
tttcgtccttacaattgcccctatgctggttctgattgttccatcacaggtgacatccca
accctcattgcacatctcaaggatgatcataaggtcgacatgcacgatggatgtaccttc
aaccatagatatgtgaaatcgaatccacaggaagtagaacatgccacatggatgcttact
gtgttcaaatgttttggaaaacaattctgcttgcatttcgaggccttccagatagggatg
gtacctgtctatatggcctttttacgttttatgggtgatgatagtgaagcaaaaaagttc
ggttattgtttggaagttggtgccaacggtcgtaagctaacatggcagggtattccaagg
agcattcgtgacggtcatcggaaagttcgtgacagtcaagatggacttgttatccaaagg
aatctagctctacacttttccggtggcgataggcaagagctgaagttgagggtaagtggc
cgtatttggaaagaagcataa
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