Gossypium arboreum (tree cotton): 108482658
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Entry
108482658 CDS
T05776
Name
(RefSeq) novel plant SNARE 11-like
KO
K08494
novel plant SNARE
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108482658
Membrane trafficking [BR:
gab04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
108482658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Prominin
Cauli_AT
DUF5089
DUF948
DUF7201
MCPsignal
Exonuc_VII_L
PigL_N
Occludin_ELL
V-SNARE
DUF6988
DUF1664
PepSY_TM
ING
Med11
TMPIT
Zw10_N
FapA
JHD
Synaptobrevin
PCRF
Motif
Other DBs
NCBI-GeneID:
108482658
NCBI-ProteinID:
XP_017641272
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All DBs
Position
1:complement(871676..876940)
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AA seq
262 aa
AA seq
DB search
MDSLSAVSEELAEIDGQIADIFRALSNGFQKLDKIKDVNRQSRQLEELTGKMRECKRLIK
EFDREVKAMERRTNANTHRMLSEKKQSMVKELNSYVALKKRYQGNLESNKRVDLFDGPNE
GFSEDNDMLASNMTNQQLMDKGYQMMDETDQAINRAKKVVQETVDVGTETGATLKAQTEE
MSRIVNDLDSIHFSIQKASKLVKEIGRQVATDKCIMALLFLIVTGVIAIIIVKFVNPNNK
EIRDIPGLAPPAMNRRLLWTPH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggattcattatccgcggttagcgaagagctagcggagatcgacggacaaatcgccgat
atttttcgagcattatcgaatgggttccagaaactggataagattaaggatgttaatcga
cagagcaggcaattggaagagcttaccggcaagatgcgagagtgtaagaggctaatcaaa
gagtttgatagagaagtaaaggcaatggagagaagaactaatgcaaacacccatagaatg
ctgagcgaaaagaagcaatcaatggtcaaggagttgaattcatatgttgcccttaagaaa
cgatatcaaggcaaccttgagagtaataaacgagttgatctctttgatgggcctaatgaa
ggctttagtgaagataatgacatgctagcttccaatatgacaaaccagcagctaatggat
aaaggataccaaatgatggatgagactgatcaagccattaacagggctaagaaggttgtt
caagaaactgttgatgttggaacagagactggtgcaactctcaaggctcagactgaagaa
atgagcaggatagttaatgatctcgattctatccatttttcgatccaaaaagcatctaaa
ttagtcaaagaaattggtaggcaggttgctactgataagtgcattatggcactattattt
ctcattgtgaccggtgtcatagccatcataattgtcaagtttgtgaatccaaacaacaag
gaaatccgggatattccaggactagcaccgcctgcaatgaaccgtcgattactttggact
cctcattga
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integrated database retrieval system
