Gossypium arboreum (tree cotton): 108482816
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Entry
108482816 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108482816
KO
K17925
sorting nexin-13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gab04990
]
108482816
Domain-containing proteins not elsewhere classified [BR:
gab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108482816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108482816
NCBI-ProteinID:
XP_017641398
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All DBs
Position
10:8893349..8900763
Genome browser
AA seq
1139 aa
AA seq
DB search
MNRQKPKPVTVGDLVEEAKKRIVILAICVVGLSYLMSVTSSSVLVNLPAAASLIILLRYF
SLEYEMRRKADAYNIKSEATDSLTSKQPPECPKVIGHCDWRRKVNSPVVENAIDQFTRHV
ISEWVTDLWYSRLTPDKEGPEELVQIINGVFGELADRMRNINLVDLLTRDLINLFCSHLE
LFRISKAKFENQQSAPLTIEYRDAEIRRVLAAENKLHPALFSTEAEHKVLQHLMNGLISL
TFRPEDLQCTFFRYVVRELLACAVIRPVINLASPRFINERIESAVITMTKAKGGLNAAQD
ASQHKPNSSSKIPSDHFSKFLDPSVTGVELVQLKTNQSGAAGGTIAADNLNGTQLSKDPL
LSMDTRTSRSWSSVSLNSQTGAERGIERHRSGGEWGDMLDLMSRRKTEALAPENFENIWT
KGRNYKKKEGEKRFTEQVPQHSSAGNPATVDHSKVVSKTRDKYPTKLNSSESYGAQHALT
DKWKIEKSFPHEVRNVPHCSSVLSYQEDDDHDLVDFEEVESESNDSFTSGEEEAGNVLGL
DATGTKVWDSKSNRNLTVSHIHHPLENPAGHMIKKAGGMRVQYRRLTRATSSRKRSRLTG
QKLPVWQEVERTSFLSGDGQDILNSLNGHGKTEYSSDDSEAEFFGRLHSGASASSSASSV
AVSETCNLTANSLQNSLAVGSFFKLRCEVLGANIVKSGSKTFAVYSISVTDVNNKHSWSI
KRRFRHFEELHQRLKQFPEYKLHLPPKHFLSTGLDIPVIRERCKLLDEYLKKLLQLPTIS
GSIEVWDFLSVDSQTYVFSNSFSIIETLSVDLDDNPSEKGRKASNVMGPLMGPLSSSRQL
LDTESKGPSSQIRPNHATDGLRKAKDVRYSPSKNPTEEWCKSVEDTGSGDARVRNTSSIK
NTGKNVKGRENERVEDASELLLDAATYPALPVEWVPPNLTAPLLDLVDVIFQLQDGGWIR
RKAFWVAKQILQLGMGDAFDDWLIEKIQMLRRGSVVASGIKRIEQILWPDGIFITKHPRR
QRPPPSSSPSQASPRSQSPELSSPRLTDEQQQLEAERRAKFVYELMIDKAPAGIVGLVGH
KEYEQCAKDLYFFIQSSVCLKLLAYDLIELLMLSAFPEMEYVFKQLHEEKHKFGEYKAN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggcaaaagccgaagccggtgacggttggtgacttggtggaggaagccaagaag
cgaattgtgattttagctatatgcgtcgtcggattgtcctatctcatgtcagtgacaagc
tcctcggttttggttaatttgcctgctgctgcctccttaatcattctcctccggtatttc
tcgctcgaatatgaaatgcggaggaaagctgatgcatacaacatcaaatctgaagctaca
gattccttgacttcaaagcaaccaccagaatgtcctaaagttattggacattgtgattgg
agacgtaaagtaaattctcctgtcgttgagaatgcaatagatcaattcacaagacatgtt
atttctgagtgggtgacagatctatggtattctcgtttaacacctgataaggaaggtcca
gaagaattggtgcagatcataaatggtgtttttggggagctagcagaccgcatgagaaat
ataaatctcgttgatttactcacaagggacctaattaatctcttttgttcacatttggag
ctttttcgtatcagtaaagctaaatttgaaaatcagcaatctgcaccactaactatcgag
tatcgagatgctgaaataagacgtgttctggctgcggagaataaactgcacccagcttta
ttctctactgaagctgagcacaaggtgttgcaacatttgatgaatggtctaatttctctc
acattcaggcccgaagatctgcagtgcactttctttcgttatgttgtcagggagcttctg
gcctgtgcagtaattcgacctgtcataaacttagcgagtccaaggtttataaacgagagg
atcgaatctgctgttataactatgacaaaggctaaaggaggacttaatgctgcacaagat
gcatctcaacacaaaccaaatagttcctcaaagatcccatctgatcatttttctaagttt
ctagatccttctgtcactggtgttgaacttgtacagttgaaaactaatcagtccggagct
gctggaggcaccattgcagcagataacctaaatggaacacaactttcaaaggatccattg
ctttccatggatactcgaacttctcgttcatggagctctgtgtccttgaattcacaaact
ggtgctgaaagaggtatcgaacgacatcgttctggtggagaatggggtgacatgttagat
ctcatgtcacgtagaaagactgaggcccttgctcctgaaaattttgagaacatttggaca
aaagggagaaattacaaaaagaaggaaggtgaaaaacgatttactgaacaagttccacag
cattcctctgctgggaaccctgctacagtggatcattcaaaagtagtatctaagaccaga
gacaagtatccaaccaagcttaactcatctgagagttatggtgctcaacatgcactaact
gataagtggaaaatagaaaaatcattcccacatgaagttaggaatgtaccacactgctct
tcagtactatcttatcaggaagatgatgatcacgaccttgttgattttgaagaggttgaa
tcagaaagcaatgattccttcacttcaggagaagaagaagcaggaaatgtactgggtctt
gatgctactggaactaaagtttgggatagtaagagtaacagaaatctgaccgtttctcac
attcatcatccacttgaaaatcctgcaggccatatgataaagaaggctggtggaatgcgt
gtccaatatcgaagattaactagagccacatccagcaggaaaagatctagattgaccggt
cagaagttgcctgtctggcaagaggttgagagaacaagcttcctatcaggagatggacaa
gacatacttaattcattgaatggacatggaaaaactgaatattccagtgacgattctgag
gctgaattctttggtcgacttcacagtggagcaagtgcttcttcatctgcttcttctgtc
gctgtttcagaaacttgtaatttgactgctaattccttgcaaaattcgttggctgtgggt
tctttttttaaattgagatgtgaggttttaggtgcaaacattgtgaagagtggttctaaa
acatttgctgtttactccatatctgttacagatgtaaataacaagcatagttggtctatc
aagagaaggtttcgacattttgaggagctgcatcagcgccttaaacaatttccagagtat
aaacttcacttgccgccaaaacattttctctcaacaggtttagacattcctgtaatacga
gaacggtgtaaattgcttgatgaatatttaaagaagctcctgcagcttcctactatttca
ggatcaattgaagtttgggacttcttaagtgttgattcgcagacatatgtattctcgaat
tctttttctatcatcgaaactttgtcagttgaccttgacgataatccatctgaaaaggga
agaaaggcttcaaatgttatggggcctctgatgggtcccttatcttccagtagacaacta
ttagacactgaaagcaagggaccttcatcgcaaatcaggcctaatcatgcaacagatgga
ttaagaaaagcaaaagatgtgcgttattctccatcaaaaaatcccactgaagaatggtgc
aagtctgttgaagatacaggcagtggtgatgctagagtgcgaaatacttcgtctataaaa
aacacagggaagaatgttaaaggaagagagaatgaaagagtggaagatgcttctgagttg
cttcttgatgctgctacatatccggcccttcctgtggagtgggtgccaccaaatttaaca
gctcccttgttggatttggtggatgtcattttccagctccaggatggtggatggataagg
cggaaggctttttgggtggccaaacaaattctacaacttggaatgggtgatgcttttgat
gactggctgatagaaaagatccagatgctgcgcaggggctcagttgttgcgtcagggatc
aagcggattgagcagatactttggcctgatggaatattcataaccaaacatccaaggcga
caacgtccgccaccatccagtagcccatcccaagcttcacctcgttcacaatctcctgaa
ttatcttcacctagattgactgatgagcaacaacaactggaagcagaacgtcgtgcaaaa
tttgtttatgagctaatgattgataaagcacctgctggtattgtgggtcttgttggtcac
aaggaatatgaacagtgcgccaaggatctctatttctttattcagtctagtgtctgtttg
aagctgctggcatatgaccttattgagctattgatgttgtcggcatttccagagatggaa
tatgttttcaagcagttgcatgaggaaaaacataagtttggtgaatataaagcgaactaa
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