Gossypium arboreum (tree cotton): 108482865
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Entry
108482865 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase RZF1 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108482865
04121 Ubiquitin system [BR:
gab04121
]
108482865
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108482865
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108482865
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108482865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-Nse
zf-RING_16
zf-RING-like
YthB
Motif
Other DBs
NCBI-GeneID:
108482865
NCBI-ProteinID:
XP_017641441
LinkDB
All DBs
Position
1:complement(118837752..118839214)
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AA seq
376 aa
AA seq
DB search
MYDNICCFQCDDFVNLNQINQNRRKASENEKKKMSLSPPRARVNGAAPGRNYRLYWCYHC
HQSVRIASTNPSEIVCPRCFGRFVCEMEINRPRMVVDFTAFDPSPEARLLEALSLIMDPP
IRLFSLGNSDSQESRGRPWLRRRNNLLESEGENRPLERLRRHRSRSLDGTDDREQEPESL
GHPRTWIIVPPPGPFGLGQAGPTFPHETPGRPALDPRNFFSGPGLNELIDQLTQNDRPGV
PPAPESTIDAIPTVKITESHLRNDSQCPVCKEEFKVGEEARELPCNHIYHSDCIVPWLRL
HNTCPVCRHELPVSSTDEQSSNDCFSEPEVSSRRRGWRLRQLASNLWPFHWRHQRINPET
YGTPAVESRSQGCCIL
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataatatatgttgtttccaatgtgatgatttcgtaaacctcaaccaaatcaat
caaaacaggagaaaagcatctgaaaacgagaagaagaagatgtctctaagcccacctaga
gcaagggtcaatggtgcggcccctgggaggaactaccggctttactggtgctaccactgc
catcaatctgtccggattgcttctacaaatccgtcggagattgtctgccctcgatgtttt
gggcggtttgtttgcgagatggaaatcaacaggcctaggatggttgttgatttcactgct
tttgatccatcccctgaagctcgtctgttggaagcactctctcttattatggatcctcct
atcaggctattcagtcttggtaattctgatagccaagaatctcggggcaggccttggttg
agacgtcggaacaacttactagaatccgaaggtgaaaatcggcctctggagcgtcttcgt
aggcacaggagccggagtttagatggaactgatgatagagaacaagaacctgaatctcta
ggtcatcctaggacttggattattgttccaccgccgggtccttttggcctaggccaagca
ggaccaacttttccgcatgaaacccctggacgccctgctctggatccaaggaacttcttt
tccggaccaggactaaatgagttgatagatcaactaacacaaaatgacaggccaggagta
ccaccagctccggagtcaacaatcgacgcaattccaacagtaaagatcacggaatcgcat
ctacgcaatgattcgcaatgcccagtctgtaaggaagaattcaaggttggtgaagaggca
agagagttgccttgtaaccatatataccacagtgattgtattgtgccttggttaaggctc
cacaatacttgccccgtttgccgccatgagttgcctgtcagcagtactgatgaacaatcc
agcaatgactgtttctccgaacccgaggtttcttccagaagaagaggttggaggcttagg
caactggctagtaatttgtggcctttccattggaggcatcagagaattaacccagagacc
tatggaactcctgcagttgaatcaaggtcgcagggatgctgtattctttag
DBGET
integrated database retrieval system
