Gossypium arboreum (tree cotton): 108482889
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Entry
108482889 CDS
T05776
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03030
DNA replication
gab03410
Base excision repair
gab03420
Nucleotide excision repair
gab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108482889
03410 Base excision repair
108482889
03420 Nucleotide excision repair
108482889
03440 Homologous recombination
108482889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108482889
03400 DNA repair and recombination proteins [BR:
gab03400
]
108482889
Enzymes [BR:
gab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108482889
DNA replication proteins [BR:
gab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
108482889
DNA repair and recombination proteins [BR:
gab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
108482889
NER (nucleotide excision repair)
GGR (global genome repair) factors
108482889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
108482889
NCBI-ProteinID:
XP_017641465
UniProt:
A0A0B0MAF8
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Position
1:110802664..110810299
Genome browser
AA seq
1163 aa
AA seq
DB search
MATMGIVSSTSQTAATPFGRPFCPSSSWFFRSRSRHFFLASSRALQRREMCTMQSVHCAF
LSATMSSSSRHCHHPKDMRLQVAPSEYARMVHPDPDWYLSDNKYKGVSVDHKKNENSASF
GKSEVQSFRVNDFTFTPKITGIPNAAHSWEKEAHRMKKNKEMAKESFKGRNFSSDDQQYL
NLNKEMAKESFKGRNFSSNNQQYLNLKLTGSLFKTTNKEESVSGNNGRSVTIYESHCPPL
PTSNNQISIENTVATDEINGFKQLKGSSRTEVSGNGSLPGLVFDDHEDLGTCEDSDFLFE
DHSPQPPTSSKQISRAKSVNSDTINGSKQLNGSSQGAVSDDIQYRRHMDPNATRRDQANE
NGVASSEENLPVYRNDIHKQLAKIYNQVLVVDNISVAKEVVLMLTTKFRHLVHACDTEVS
NIDVKQETPVDHGEITCFSIYSGADADFGNGKYCIWVDVLDGGGRDLLKEFVPFFEDQSI
KKVWHNYSFDSHVISNYGLEVSGFHADTMHMARLWDSSRRTLGGYSLEALTGDRNVMQRS
TWRKEEKELIGKTSMKTIFGKKKVKKDGSEGKMITIAPVEELQREERKLWICYSALDSIS
TLRLYESLKSKLSSMSWVFDGKTIPGKSMYHFYEEYWRPFGELLVKMEREGMLVDRMYLA
QLEKVAKVEQEIAANRFRIWASRYCDDAKYMNVGSDTQLRQLLYGGILNSKDPNVSLPEE
KTFKIPNVDKVIEEGKKAPTKFRNIKLCSIGVKLPAEIYTATGWPSVSGVALKSLAGKVS
AEYDFTEDTGDGDIDDYPETMIAVDTSAYGTAFAAFEDEEKGREACHAIASLCEVCSIDS
LISNFILPLQGSNVSGKGGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFVA
APGNSLVVADYGQLELRILAHLADCKSMLDAFKAGGDFHSRTAMNMYSHIHEAVEEGQVL
LEWHPQPGEEKPPVPLLKDAFASERRRAKMLNFSIAYGKTPVGLAKDWKVSVEEARNTVD
LWYKERQEVLEWQKQRKFEAQKFGCVKTLLGRARRFPSFAHCTRAQKGHIERAAINTPVQ
GSAADVAMCAMLQISKNECLKELGWRLLLQVHDEVILEGPSESAEIAKAIVVDCMSKPFG
GKNTLKVELAVDAKCAQNWYAAK
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctactatggggattgtttcttctacttcccaaactgctgctacccctttcggtaga
ccgttttgcccttcttcttcttggttttttcggtctcgttccagacacttctttttggct
tcttctagagccttacaaaggcgagaaatgtgcacgatgcagagtgttcactgtgctttt
ctcagtgcaaccatgtcaagtagttcccggcattgccatcatcccaaagatatgagactt
caggtagctccttctgaatatgccagaatggtccaccctgatccagattggtatctctct
gataacaagtacaaaggagtgagtgttgaccataaaaagaatgaaaactccgctagtttt
ggaaagtctgaagtacaatcatttcgagtgaatgattttacttttactccaaaaattact
ggcatacccaatgctgcacactcatgggaaaaagaagctcataggatgaagaaaaataag
gagatggcaaaggagagctttaaaggccgtaatttttcttccgacgaccaacaatacttg
aatctgaataaggagatggcaaaggagagctttaaaggccgtaatttttcttccaacaac
caacaatacttgaatctgaagcttactggctcactatttaagacaactaacaaagaagaa
tcagtttccggaaataatgggagaagtgttactatttacgagagtcattgcccaccccta
ccaaccagtaataatcaaatatccattgaaaacaccgtagctactgatgaaataaatggt
tttaagcagctgaaaggttcaagtaggaccgaagtttctggtaatggatcattgccaggg
ctggtcttcgatgaccacgaagaccttggaacctgtgaagatagtgattttctatttgag
gatcattctccgcaacccccaactagcagtaaacaaatttctagagccaaaagtgtaaat
tccgatacgataaatggttccaagcagttaaatggctcatcacagggggcagtttcagat
gacatccaatacagaagacatatggatcccaatgcaaccagaagggaccaagccaatgaa
aatggggtggctagcagtgaagaaaatctcccagtttatcgaaatgatattcacaagcag
cttgctaagatttataaccaggttcttgttgtagataatatctccgtcgcgaaggaagtt
gttctgatgcttacaaccaaattcaggcatcttgttcatgcatgtgatactgaggtatct
aatattgatgtgaagcaagagacacctgttgatcatggtgagataacatgtttcagtatt
tattcgggagcagatgcagattttggaaatgggaagtactgtatctgggtcgatgttcta
gatggtggtggcagggatcttctgaaggaatttgttccattttttgaagatcaatccatc
aaaaaggtgtggcacaattatagttttgacagtcatgttatcagtaactatgggcttgag
gtttctggatttcatgctgacacaatgcatatggcacggttgtgggactcatcaagacgt
acattgggtggttattctcttgaagcacttacgggtgatagaaatgttatgcaaaggagc
acatggcgtaaagaagaaaaggaactgataggtaaaacatcaatgaaaaccatttttggc
aagaaaaaggtgaaaaaagatggatctgagggaaaaatgatcaccattgcccctgttgag
gagttacagcgggaagaacgcaaattatggatttgttattctgccttagattctataagc
acactgaggctttacgagagcttgaaaagcaaattatcaagcatgtcttgggtatttgat
ggtaaaacaattcctggaaagtccatgtatcacttctatgaagagtattggcggccattt
ggtgagcttcttgtaaaaatggaacgtgagggaatgttggttgatcggatgtatcttgct
cagctagagaaggttgctaaagtagagcaagagattgctgctaataggtttcgcatttgg
gcatctagatattgtgatgatgccaagtacatgaatgtgggtagtgatactcagctccgc
cagcttctttatggtggcatacttaacagcaaggatccaaatgtgagcctccctgaagag
aaaactttcaaaattccaaatgttgataaagtgattgaagaaggcaaaaaggctcccact
aagtttcgcaatattaagctatgtagcattggtgttaagctccctgctgagatttacact
gccactggttggccatccgttagtggtgttgctttgaagagtttagctgggaaggtttcc
gctgaatatgatttcacagaggacaccggtgatggtgatattgatgattatcctgaaaca
atgattgcagttgatacatctgcatatggaactgcgtttgcagcttttgaggatgaggaa
aaggggagggaggcatgccatgctattgcatcattatgtgaagtttgctctatcgactcc
cttatatccaatttcattctacccttgcaggggagtaatgtatcaggaaagggtgggcgt
gtccattgttcattgaatatcaatacagaaactgggcgcttatctgcaaggagaccaaat
ttgcagaatcaacctgctctagagaaagatcgatataagatacgtcaggcctttgtggct
gcccctggaaattctcttgttgttgcagattatgggcagctggaacttaggattcttgca
catctggctgactgtaaaagcatgttggatgccttcaaagctggtggagatttccattca
aggactgcaatgaacatgtactctcatatccacgaagccgttgaagaggggcaagttctt
cttgagtggcatcctcaacctggtgaagagaaaccgccagttccacttttaaaggatgcc
tttgcttctgaaagaagaagagctaaaatgcttaacttttccattgcatatggaaaaact
cctgtggggcttgctaaggattggaaggtttctgtagaagaagcaaggaacactgttgat
ctatggtacaaagaaagacaagaagtacttgaatggcagaaacagcgtaaatttgaagct
cagaaattcggctgtgttaagacattgcttggaagggctcgccgcttcccatcgtttgct
cattgtacacgtgctcagaaaggtcatattgaacgggctgctatcaatactccagtgcag
gggagtgccgctgatgttgcaatgtgtgctatgttacaaatatcaaagaatgaatgtcta
aaggagcttgggtggaggcttcttttacaggttcacgatgaagtaatcttggaaggacca
agtgagtcggctgagattgcaaaagcaattgttgttgactgcatgtcaaagccctttgga
ggaaagaacactcttaaagttgaactagctgttgacgccaaatgtgctcaaaactggtat
gctgccaaatag
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