Gossypium arboreum (tree cotton): 108482896
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Entry
108482896 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108482896
KO
K13091
RNA-binding protein 23/39
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108482896
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
General mRNP proteins
108482896
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
DUF1866
RRM_8
Motif
Other DBs
NCBI-GeneID:
108482896
NCBI-ProteinID:
XP_017641483
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All DBs
Position
1:complement(123293916..123301156)
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AA seq
591 aa
AA seq
DB search
MDFDEYEYLENTVENPEPQKAKKENGNGSVDTVKSEERNRSRSSKHKRDERADGSDDYHH
PSKHSKSREESSRDHDQRKELGLSQLSRSRDGEKDRQRSSREHRSKDRDREDRNGREREK
ERDRDRKERDRESERDRERERERERSRRSRSRSEREPDKSRDMEFREREKEREPRERDRG
SRRYKDKKEDAAEAEVDPERDQRTVFAYQISLKASERDVYEFFSRAGKVRDVRLIMDRNS
RRSKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSASAGQTGPYA
AGGRKLYVGNLHFNITEDQLRQVFEPFGSVELVQLPLDETGHSKGFGFVQFARLEDAKNA
LNLNGQLEIGGRVIKVSTVTDQGVSQDFGTNATAADLDDDDGGGLSLNSSSRALLMAKLD
RSGTASSIAGSVGMPANNSTGLTASTAPILGVAPSLPSLVPPTIPTSISTIPGLPGGLQL
PTNGIPVIDTIGSPSECLLLKNMFDPTLETEPEFDLDIKEDVQEECSKFGKLKHIHVDRD
SAGFVYLRFEDAQGAINAQRNLHGRWFAGKMITATYMVPQTYEAKFPSSKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggattttgatgaatatgagtatttagagaacacagttgagaatcctgagcctcaaaaa
gcaaagaaagaaaatggaaatggcagcgttgatactgtcaaatctgaggagagaaatcga
agtcggagttcgaagcataagagggacgagagagctgatggttctgatgattatcatcat
ccttccaaacactcgaagtcgagagaggagtcatcacgtgatcatgaccagcgcaaggaa
ctaggcttatctcagctgtcacggtctagagatggagagaaggataggcaacgaagcagt
cgagagcacaggtccaaggacagggatagggaggataggaatgggagggaaagagagaag
gaacgtgatcgagacaggaaagagcgtgatcgtgaaagtgagagggatagagaaagggaa
agggagagagagcggtcaaggagaagcaggagccgatcagaaagagaaccagacaagagt
cgtgacatggagttcagagaaagagaaaaggagagagagccaagggaacgagacagagga
agcaggaggtataaagacaaaaaggaagatgcggcagaggctgaggttgatccagaaagg
gatcagagaaccgtatttgcttatcagatatccttgaaggctagtgaaagagacgtttat
gaattcttctctagggctggcaaggtacgagatgttcgcctcattatggatcgaaactca
agacgttctaaaggggttgggtatattgagttctatgatgttatgtctgtccctatggca
atagcactctccggacagcctcttcttggtcaaccagtgatggtgaaaccatctgaagct
gagaagaatctagttcaatcaactacatctgcatcagctggacagactggtccatatgct
gctggcggtagaaagttgtatgttggtaacctacatttcaacattacagaagaccaactg
cgtcaggtttttgaaccttttggttctgtggagctcgttcagttgcctcttgatgaaact
ggtcattctaaaggttttggttttgtccagtttgcccgtctggaagatgcaaagaatgca
ttgaatttgaacggacagctggagattgggggtcgagtaatcaaggtatcgactgttact
gatcaaggtgtatcgcaagattttggaactaatgctactgctgctgatcttgatgatgat
gatggtggtggcttgtctctgaattcatcatctcgagcacttcttatggcaaagctggat
cgcagtggcactgcatcaagtattgctggcagtgtaggcatgcctgctaataatagcact
ggccttactgcttcaacagcaccaattcttggagttgcaccttcattgccatcccttgtt
cctcctacgataccgacctctatttctaccattcctggacttccaggtggtcttcaactc
cctacgaatggcatccctgttattgacacaattggaagtccaagcgaatgcctgttgtta
aagaatatgtttgatccaaccctggagacggaaccagaatttgatttggatatcaaagag
gatgttcaggaagaatgtagcaagtttggaaaattgaagcatatacacgtggacagggac
agtgctggttttgtgtacttacgatttgaagatgcacaaggtgcaatcaatgcacaacgg
aacctacatgggagatggttcgctggaaaaatgatcaccgcaacatacatggtgccacaa
acttacgaggcaaagtttccaagcagcaagagatag
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