KEGG   Gossypium arboreum (tree cotton): 108482949
Entry
108482949         CDS       T05776                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent zinc metalloprotease FTSH, chloroplastic
  KO
K03798  cell division protease FtsH [EC:3.4.24.-]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gab01002]
    108482949
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:gab03110]
    108482949
Peptidases and inhibitors [BR:gab01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   108482949
Chaperones and folding catalysts [BR:gab03110]
 Other chaperones and cochaperones
  AAA proteases
   108482949
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 AAA_5 AAA_16 FtsH_ext nSTAND3 AAA_22 AAA_2 AAA_28 RuvB_N IstB_IS21 TIP49 Mg_chelatase AAA_33 AAA_14 AAA_lid_PRS2_C LonB_AAA-LID AAA_7 AAA_17 ORC-CDC6-like
Other DBs
NCBI-GeneID: 108482949
NCBI-ProteinID: XP_017641553
LinkDB
Position
5:complement(15579134..15582382)
AA seq 699 aa
MANSFLSSNFFGTQLLLSPPTPKTTRKLQVTQSILNNKPNSNHTFRALQSHATLAALYFS
SVTPQALAVDNAPPTPPPVIEAQPTNPSPLNQSPFSQDLLLTAPKPQSQSSDLPEGSQWR
YSEFLNAVKKGKVERVRFSKDGSFLQLSAVDGRRASVIVPNDPDLIDILAMNGVDISVSE
GESGNGLFNFIGNLLFPFLAFAGLFFLFRRAQGGPGGPGGLGGPMDFGRSKSKFQEVPET
GVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAG
EAGVPXFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLGGG
NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGR
VKILQVHSRGKALAKDVDFEKIARRTPGFTGADLQNLMNEAAILAARRDLKEISKDEISD
ALERIIAGPEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTF
FAPSEERLESGLYSRSYLQNQMAVALGGRIAEEVIFGEENVTTGASNDFMQVSRVARQMV
ERFGFSKKIGQVAIGGPGGNPFLGQQMSSQKDYSMATADVVDAEVRDLVETAYSRAKQII
TTHIDILHKLAQLLMEKETVDGEEFMSLFIDGKAELYVS
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggctaactcattcctttcatcaaactttttcggaacccaactcttactctctcctcca
actccaaaaactacaagaaagttgcaagtaactcagtccatcctcaacaacaaacccaac
tcaaaccatacctttagagccctccaatctcatgccactttagctgccttatacttctct
tccgttacgccgcaagcactagcggtggataacgctccgcccactccaccgcctgtgatc
gaagcccagccaaccaatccaagccctttgaaccagtcacccttctctcaagacctgctc
ttaactgctcccaagcctcaatctcaatcctctgaccttcccgaaggcagccaatggagg
tacagtgagttcttgaacgcagtcaagaaggggaaagtggagagagtcaggttcagcaaa
gacggttccttcctccaactctccgccgttgatggtcgtcgagcctctgtgattgtcccc
aatgaccccgatctcatcgacattttagccatgaatggtgtcgatatttcggtgtccgag
ggtgaatccggtaatgggcttttcaactttattgggaatttgcttttcccttttcttgca
tttgccggattgttctttctcttccgtcgggctcaaggtgggccaggtggccccggtggg
ctcggcggacccatggattttggacgctccaaatccaagttccaagaagtgccagagact
ggagttacctttgctgacgtagctggagctgaccaggcaaagttggaactccaagaagtt
gtcgatttcttgaagaacccagacaagtacacagctttaggagctaaaatcccgaaaggt
tgtttattagttggccctcctggtaccggaaagactctattggcgagagccgtggcaggg
gaagccggggtgcccnttttctcatgcgcagcttcggagtttgtggagttgttcgttgga
gtaggcgcgtccagggtaagggatttgttcgaaaaggcaaaatccaaagcgccttgcatt
gtattcatagatgagatcgatgctgttgggagacagagaggagctgggcttggaggagga
aatgatgaaagagagcagacaatcaaccagttgctgactgagatggatggattttcgggg
aattccggtgtcattgttttggcagcaactaacaggcccgatgttcttgatgcggcttta
ttgaggcccggtaggtttgaccgacaggttacagttgataggcctgatgttgctgggaga
gtgaaaattcttcaggtgcattccagaggaaaggcacttgcaaaggacgtggattttgaa
aagattgcaaggagaaccccgggtttcactggagctgatttgcagaacctgatgaatgaa
gcggccattcttgcagccaggcgtgacctcaaggaaataagcaaagatgaaatatcagat
gccctagagaggatcattgctggaccagagaagaaaaatgctgtggtctccgatgagaag
aagaaattggttgcctatcatgaggctggccatgctttagttggtgcactcatgcctgaa
tatgatcctgtggcaaagatttctatcattcctcgtggtcaagctggtggccttaccttt
tttgctccaagtgaggagaggcttgaatctggtctctacagccgaagttacctacagaac
cagatggcagttgcactcggtggaaggattgcggaagaagtaatttttggtgaggaaaat
gtgacaacaggagcatcaaatgactttatgcaagtctcacgagtggcaaggcagatggtt
gaaagatttgggttcagcaaaaagattggacaagttgccattggtggacctggtggaaat
cctttcttaggacaacagatgtcttctcaaaaagactactcaatggcaactgctgacgtg
gtggatgctgaggtaagggatctagtagagacagcgtattcaagggcaaagcagataatc
acaacccacattgacattctccacaagcttgctcaacttctaatggagaaggaaactgtt
gatggagaagagtttatgagcctcttcattgatggaaaagctgagctatatgtttcttag

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